Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01175 ATGGATCGAGCGCAAGAGATTAGAGGAAGTGATAAACTTGCAAGTTGTGATGCCTACTTTGAAGCCATTCAATCAAGAAAGAAATTACCACAACCGTTACAAGAGAAACTCACAGATGCTTTTGCACAGATCCCAGTTTCATCTTTTCCTCAAGTTCCTGGAGGGAAAGTGATTGAGGTTCTAGCAGACACATCTGTTGGTGAAGCTGTGAAGACGCTCTCCGACAACAACATATTGTCGGCTCCGGTCAGAAACCCGGATGCCCATGAAAGTTCGGATTGGAGAGACAGGTATCTCGGCATCTTAGACTACTCAGCAATTATTCTCTGGGTGCTGGAGAGTGCTGAGCTTGCTGCGGTTGCTTTATCAGCCAGTACTGCAGCAGCAGCTGGAATAGGTGCAGGAGCAGTGGGTGCTCTGGGAGCACTTGCAGTAGGTATGACAGGTCCTGCTGCAGTGGCCGGACTAACTGCCGCTGCCGTTGGCGCTGCAGTAGCAGGTGGTGCCTCTGCAGACATGGGGATAGGAAAGGATGCTCCCACCGCTGTTGATAAATTGGGCAAGGACTTTTACGAGGTCTTATTAAAAGAAGAACCCTTCAAGTCGACCCCAGTAAGATCAATAGTTAAATCATATCGATGGGCTCCTTTTGTGCCGGTTTCGAAGGATAGCTCTATGCTGAGTGTGATGTTACTCCTCTCAAAATATAGGCAAAGGAATGTACCAGTTATAGAACCAGGCAAGCCTGAGATCAAGAACTTCATTACTCAGTCTGCAGTAATTCAAGGTCTTGAGGGATGCAGAGGGAGGGACTGGTTTGACTGCATTGCTTCAACCCCAATCTCTGATTTGGGACTTCCTTTCATGTCTCCTGAAGGGGTTATCAGCATCCAAATGGAAGAACTGGTTCTTGAAGCTTTCAGGCGAATGAGGGACAATCAAATAGGTGGCATGCCAGTAGTAGAAAGTCCAAAGAAGAAGATTGTTGGAAATGTTAGCATAAGAGACATCAGACATCTTCTGCTAAGACCAGATCTTTTCGCCAATTTCAGGAAGCTGACAGTGGCAGATTTCTTAAACACCCTCAAGTCGACACAAGGAATGGAAAACGTTGCTCCAATTCCAGCGATAACATGCAAACTTGACTCCACTTTGGATACAGTGATCCACACTCTTGCTTCCAAGTCCGTACACAGGATTCATGTGGTAACAGCAGAAGACGAAGTGCTTGGCGTAATTACTCTGAGAGATGTGATATCTTGTTTCGTCTACGAACCCGCAAACCATTTTGACAACTACCTTGGTTTCGGCATGAAAGAAATGTTGACTCAATGA 1335 0.4622 MDRAQEIRGSDKLASCDAYFEAIQSRKKLPQPLQEKLTDAFAQIPVSSFPQVPGGKVIEVLADTSVGEAVKTLSDNNILSAPVRNPDAHESSDWRDRYLGILDYSAIILWVLESAELAAVALSASTAAAAGIGAGAVGALGALAVGMTGPAAVAGLTAAAVGAAVAGGASADMGIGKDAPTAVDKLGKDFYEVLLKEEPFKSTPVRSIVKSYRWAPFVPVSKDSSMLSVMLLLSKYRQRNVPVIEPGKPEIKNFITQSAVIQGLEGCRGRDWFDCIASTPISDLGLPFMSPEGVISIQMEELVLEAFRRMRDNQIGGMPVVESPKKKIVGNVSIRDIRHLLLRPDLFANFRKLTVADFLNTLKSTQGMENVAPIPAITCKLDSTLDTVIHTLASKSVHRIHVVTAEDEVLGVITLRDVISCFVYEPANHFDNYLGFGMKEMLTQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01175 444 Gene3D - 52 266 IPR046342 -
Pte12g01175 444 ProSiteProfiles CBS domain profile. 289 347 IPR000644 -
Pte12g01175 444 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 47 423 - -
Pte12g01175 444 SUPERFAMILY CBS-domain pair 37 262 IPR046342 -
Pte12g01175 444 ProSiteProfiles CBS domain profile. 371 432 IPR000644 -
Pte12g01175 444 Pfam CBS domain 289 342 IPR000644 -
Pte12g01175 444 Pfam CBS domain 375 420 IPR000644 -
Pte12g01175 444 CDD CBS_pair_SF 294 419 - -
Pte12g01175 444 SMART cbs_1 375 423 IPR000644 -
Pte12g01175 444 SMART cbs_1 216 265 IPR000644 -
Pte12g01175 444 SMART cbs_1 56 112 IPR000644 -
Pte12g01175 444 SMART cbs_1 293 342 IPR000644 -
Pte12g01175 444 Gene3D - 275 425 IPR046342 -
Pte12g01175 444 SUPERFAMILY CBS-domain pair 274 432 IPR046342 -
Pte12g01175 444 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01175 Pte-Chr12 31784188 31786508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g01175 - - mnt:21403963 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01175 12 31784188 31786508 Pte12g01175 12 31784188 31786508 RCT