Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00743 ATGGCCAGAGCGATAGAGAAGGAGATGGAGACTATGAGGAGGAGGGTTGCCTCTGTGGCCAACCATCTCCTTCCTTCACGTCTTGAGCATTCCATTCCTGGTTCAATTGGGCTATGCAAGACTTCCATGAATGACAGCTACCACAGAGTTCACGGTGAAATTCCCACTCATGAAGTCGCTTGGAGAGTTGTCATCGATAGCTCTGGCAAGGAATTCACTGACATAATTTACGAAAAGGCCATCGGTGAAGCCTTAGCTAAGATAACGATCAACAGACCAGAGAGAAGGAATGCTTTCAGGCCCCAAACAATTAAGGAGCTAATGCTTGCATTTGAGGATGCCAGGGATGATAGCTCCATAGGGGTTGTCATTCTCACTGGGATGGGAACTAAGGCATTTTGTAGTGGTGGTGACCAGGCATTGAGAACTGCTGATGGTTACGCTGATAATAAAACTATTGGACGTCTTAACGTATTAGATTTGCAGGTACAGATTCGCCGTCTTCCAAAACCAGTAATTGCCATGGTAGCAGGTTATGCTGTTGGAGGAGGACATATATTGCATATGGTTTGTGATCTAACCATTGCAGCTGATAATGCTATCTTTGGTCAAACTGGTCCCAAGGTTGGAAGCTTTGATGCTGGTTATGGAAGTTCCATTATGTCCCGTTTGATAGGACCCAAAAAGGCACGTGAGATGTGGTTTCTGACAAGGTTTTACACAGCTTCTGAAGCAGAGAAAATGGGACTTGTCAACACTGTTGTACCTCTGGAGAATTTAGAGCAAGAAACAATAAAATGGTGTCGAGAGATATTGAGAAACAGTCCAACAGCAATCCGAGTTCTCAAGGCAGCTCTTAATGCAGTGGATGATGGCCATGCAGGACTCCAGGAACTTTGTGGTAATGCGACAATCTTATTTTATGGCACCGAGGAAGGCGATGAGGGAAAGACAGCATATCTAGAGCGTCGACCGCCGGATTTCTCGAAATTTTCTCGGCGACCTTAA 1008 0.4544 MARAIEKEMETMRRRVASVANHLLPSRLEHSIPGSIGLCKTSMNDSYHRVHGEIPTHEVAWRVVIDSSGKEFTDIIYEKAIGEALAKITINRPERRNAFRPQTIKELMLAFEDARDDSSIGVVILTGMGTKAFCSGGDQALRTADGYADNKTIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLIGPKKAREMWFLTRFYTASEAEKMGLVNTVVPLENLEQETIKWCREILRNSPTAIRVLKAALNAVDDGHAGLQELCGNATILFYGTEEGDEGKTAYLERRPPDFSKFSRRP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00743 335 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 173 193 IPR018376 GO:0003824
Pte12g00743 335 SUPERFAMILY ClpP/crotonase 70 330 IPR029045 -
Pte12g00743 335 Gene3D - 56 274 - -
Pte12g00743 335 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 54 272 - -
Pte12g00743 335 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 273 323 - -
Pte12g00743 335 Pfam Enoyl-CoA hydratase/isomerase 82 329 IPR001753 -
Pte12g00743 335 Gene3D - 275 323 IPR014748 -
Pte12g00743 335 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 1 335 - -
Pte12g00743 335 CDD crotonase-like 75 271 - -
Pte12g00743 335 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 61 334 IPR010198 GO:0008935|GO:0009234
Pte12g00743 335 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 72 331 IPR010198 GO:0008935|GO:0009234
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00743 4 336 Acyl Lipid Metabolism Gene Families AT1G60550 77.448 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00743 K01661 - qsa:O6P43_025284 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00743 12 7702446 7705164 Pte12g00743 12 7702446 7705164 RCT