Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00738 ATGGTAGCCATAGTAGCATCGCTGCATGGTTCGAACCTCTTCTCGTCGCTTCCTTCAAGCCCACCACCCAAAGACCACTCTGTCTCTCCCCAAACTACTCCCGCTTCTCCTCCCATCCCAGTCCCCATATACCCACCTCCTCGCAAGAAATTCCTAAAACCCCAACAAACCCCACAACGCAACGCAGCTCTAAAATCCGTTCACCGCCGCACAAAGTACTTCAAACCCGTCAGAGATGGTGTCATCGCCTCAGACGGTGACCGGAGCGTTGTCATTGGCGAGTCTGGGGTTTCCTATCACCTCCCAGGTGCTCCATTTGAGTTCCAGTTTAGTTATTCTGAGACGCCTAAGGTGAAGCCAACGGCTATACGAGAGCCTGCATTCCTGCCGTTTGCACCTCCCACAATGCCGAGGCCTTGGACTGGGAAGGCCCCATTAAAGAGTTCGAAGAAAAAGATCCCACTTTTTGATTCCTTCAATCCACCCCGGCCTGGTAAGAAAGGGGTGAAGCATGTTGAAATGCCGGGTCCGTTTTCTTTGGGTAAGTATCCCGAAGAAGGGAGGACAAGGGAGGAGATACTCGGTGATCCTTTGAAGAAATGGGAGATAAGAATGCTTGTCAAGCCATTTTTGTCTGATAATACACAGGTTAATCTTGGAAGAGATGGATTAACACATAACATGTTGGAGTTGGTACATACACACTGGAAGCGTCGCCGTGTATGTAAAGTTCGTTGTAAAGGAGTTCCAACTCTGGACATGGATAACATCTGCCATCATCTTGAGGAAAAAACTGGGGGTAAGGTAATTCACCGAGTTGGAGGAGTGGTTTATCTTTTTCGTGGGAGGAACTACAACTATCGTACTCGTCCCCAGTACCCTGTAATGCTCTGGAAGCCAGCTGCTCCAGTTTACCCTAAACTTATCCAAGAAGCACCTGAAGGATTAACAAAAGCTGAAGCTGATGACATGCGGAAAAAAGGAAAAGCCCTTTTGCCAATATGTAAATTAGCGAAAAATGGAGTCTATGTTAATTTGGTGAACGATGTTAGATATGCTTTTGAAGGAAGCCCCCTGGTGAAGATTGATTGTACAGGGATGCATGCAAGTGATTACAAGAAATTAGGTGCCAAGCTTAAGGAATTGGTTCCATGTGTGCTATTATCTTTTGATGATGAACAAATATTGATGTGGAGGGGGAGAGATTGGAAATCAATCTTCCCAGTAGCTCAGCCAGCTTTACCCCCTGGTGAGGATTGCATCGGAGCAAGCTTGAAAAATCCAGCTGAGACTGATGAAGAAAGTCAGAAGGGCAATACCAAGACAGCAAGAACAAGTAGAAGAATGTGGTCATTGTGGAATCAAGCAATTGAGTCAAACAAAGCCATGTTGCTAGATGAGATTGCTCTTGGCCCTGATGCTCTACTGGTAAAGGTAGAGGAATTTGAGGGTATTTCACAGTTCACTGAGCACTCCTATCCAGCATTGATTCTGTCAAGTGAAGGTGGTGCTGCTGGCTCAACTTCAGATTCAGACACAGAAGAAAGCAGTCAAAATCACAGTTACTGCAGTGATGATGATTGGGATCCAACATACAATGATGATGATGATGAAGACGACTATGAGGAATACGAAGATGAGGATGACTCGTTCGATGATTTTAAACAATCAATTCCTCATGGCTCATTACAGGTGGATTCACTTGCTGAGAAACTCAGGAAAAAAGGAGTTCGGAAGTGA 1740 0.4569 MVAIVASLHGSNLFSSLPSSPPPKDHSVSPQTTPASPPIPVPIYPPPRKKFLKPQQTPQRNAALKSVHRRTKYFKPVRDGVIASDGDRSVVIGESGVSYHLPGAPFEFQFSYSETPKVKPTAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPRPGKKGVKHVEMPGPFSLGKYPEEGRTREEILGDPLKKWEIRMLVKPFLSDNTQVNLGRDGLTHNMLELVHTHWKRRRVCKVRCKGVPTLDMDNICHHLEEKTGGKVIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKAEADDMRKKGKALLPICKLAKNGVYVNLVNDVRYAFEGSPLVKIDCTGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGRDWKSIFPVAQPALPPGEDCIGASLKNPAETDEESQKGNTKTARTSRRMWSLWNQAIESNKAMLLDEIALGPDALLVKVEEFEGISQFTEHSYPALILSSEGGAAGSTSDSDTEESSQNHSYCSDDDWDPTYNDDDDEDDYEEYEDEDDSFDDFKQSIPHGSLQVDSLAEKLRKKGVRK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00738 579 ProSiteProfiles CRM domain profile. 196 292 IPR001890 GO:0003723
Pte12g00738 579 MobiDBLite consensus disorder prediction 14 68 - -
Pte12g00738 579 SMART CRS1_YhbY_2 198 281 IPR001890 GO:0003723
Pte12g00738 579 SMART CRS1_YhbY_2 316 399 IPR001890 GO:0003723
Pte12g00738 579 MobiDBLite consensus disorder prediction 420 446 - -
Pte12g00738 579 Gene3D - 197 293 IPR035920 -
Pte12g00738 579 Gene3D - 316 410 IPR035920 -
Pte12g00738 579 ProSiteProfiles CRM domain profile. 314 410 IPR001890 GO:0003723
Pte12g00738 579 MobiDBLite consensus disorder prediction 23 52 - -
Pte12g00738 579 MobiDBLite consensus disorder prediction 528 552 - -
Pte12g00738 579 MobiDBLite consensus disorder prediction 153 184 - -
Pte12g00738 579 SUPERFAMILY YhbY-like 316 406 IPR035920 -
Pte12g00738 579 SUPERFAMILY YhbY-like 197 291 IPR035920 -
Pte12g00738 579 FunFam CRS2-associated factor 1, chloroplastic 315 408 - -
Pte12g00738 579 MobiDBLite consensus disorder prediction 500 579 - -
Pte12g00738 579 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 47 572 IPR044599 GO:0000373
Pte12g00738 579 FunFam CRS2-associated factor 1, chloroplastic 197 292 - -
Pte12g00738 579 Pfam CRS1 / YhbY (CRM) domain 316 399 IPR001890 GO:0003723
Pte12g00738 579 Pfam CRS1 / YhbY (CRM) domain 200 281 IPR001890 GO:0003723
Pte12g00738 579 MobiDBLite consensus disorder prediction 502 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00738 Pte-Chr12 7654609 7659355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00738 - - qsa:O6P43_025275 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00738 12 7654609 7659355 Pte12g00738 12 7654609 7659355 RCT