Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00716 ATGGCCGGTGACACTGGTGCAACAACGTTGGACGAAGCGAAGGCACCTCTGTTGGGTAGTAACTCTTCTGTCATCGGATTGAAACATGAATATGAAGATGAAAGTCTTTCAAGGAGGGTGTGGATTGAATCAAAGAAACTCTGGCACATAGTTGGACCTGCAATCTTCAGTAGAATTGCATCCTATTCCATGCTAGTCATCACTCAGGCCTTTGCTGGTCATCTCGGTGACCTCGAACTCGCTGCTATCTCCATTGCCAACAATGTCATTGTTGGATTCGATTTTGGTCTCTTGTTAGGCATGGCAAGCGCTTTGGAAACACTATGCGGACAAGCGTTTGGGGCAAAGAAATTTTACATGTTAGGTGTATACATGCAACGATCATGGATTGTTCTGTTCCTGTGTTGTGTTCTTCTTTTGCCTATGTATCTCTTTGCCAGTCCGGTGTTGAAGCTATTGGGACAGCCTACAGATGTAGCCGAGCTATCTGGGTTGGTATCTGTGTGGTTGATACCACTCCATTTCAGCTTTGCTTTTCAGTTCCCTTTGCAGAGATTCCTGCAGTGCCAGCTGAAGACTGGCATCATTGCCTGGGTGTCACTTGTTTCTCTCATTGCCCATGTGTTGATCAGTTGGCTTTTTGTGTCAAAGTTTCAATTGGGGGTGATTGGTACAGCAGCAACAATAAATTTCTCTTGGTGGGTTTGTACATTAGGGCTTCTGGGTTATACTGTTTATGGTGGATGTCCAGAGACATGGACTGGTTTTTCCACTGAAGCATTTTCTGGGCTATGGGAATTTCTGAAACTATCTGCCTCTTCTGGGGTCATGCTCTGTTTGGAGAACTGGTATTACAGAATATTGATTTTGATGACTGGAAATCTTGAGAATGCGAAAATTGCAGTGGATGCTTTGTCTATATGCATGACAATTAATGGATGGGAATTGATGATTCCTCTGGCTTTCTTTGCAGCAGCTGGAGTGAGAGTTGCAAATGAACTTGGAGCTGGCAATGGCAAAGGAGCCAAGTTTGCTACAACTGTGGCAGTAATGACATCCATAGTCATCGGTCTCTTCTTCTGGCTTTTGATAATACTCTTCAATGGCAAATTTGGCTACATTTTCTCTTCAAGCGAAGTTGTCCTTCAAGAAGTAAAGAAGCTATCTGTCCTCTTGGCCTTTACCATTTTACTCAACAGTGTTCAGCCAGTTCTATCAGGTGTGGCTGTTGGCTCAGGTTGGCAATCTTACGTAGCATACATAAATCTGGGATGCTACTACCTTATTGGGGTACCTTTTGGTTTTCTGATGGGATGGGTTTTCCACCTGGGAGTCATGGGAATATGGGGAGGGATGATATTTGGTGGAACAGCAACTCAGACTTTAATTTTGGCCATTATCACAATTCGATGCGACTGGGATAAGGAGGTAATACATATAACCTCTGAACTAAAGACACCACTGTTTGAAGGGTCTCCTACTAGAATTGAATCTAAATATGAACATGAAGCTGAAGCTTTTACAAGAAGGGTATGGATCGAATCCAAGAAACTATGGCAGATAGTTGGACCTGCAATCTTCAGCAGAATTGCCTCCTATTCCATGATAGTCATCACTCAAGCTTTTGCTGGTCACCTCGGCGATGTCGAGCTGGCTGCTATCACCATTGCCAATATTGTACTTGTTGGATTCGACTACGGTCTTCTGTTGGGAATGGCAAGCGCTTTGGAAACACTATGTGGACAAGCTTTTGGGGCAAAAAAATTTTACATGTTAGGTGTCTACATGCAGCGATCATGGATAGTACTGTTCTTGTGCTGTGTTCTACTTTTGCCTTTGTATCTCTTTGCCACTCCGATACTAAAGCTGTTGGGACAGCCTCCAGATGTGGCAGAGCTAGCTGGAATGGTGACTGTCTGGTTGATACCACTTCATTTCAGCTTTGCCTTCCAGTTTCCTTTGCAGAGATTCTTGCAGTGTCAGCTGAAGAACGCAGTCACTGCTTGGGTGTCACTGGTTGCACTTGCTGTGCATGTCTTCATCAGTTGGCTGTTCGTGTACAAGCTGAAACTTGGAGTGATTGGTGCTGCTGCTACTATAAACTTCTCTTGGTGGGTTTTGGTATTTGGACTTCTGGGTTACACTGTTTATGGTGGTTGCCCACAGACATGGACTGGTTTCTCCATTGAAGCATTTTCTGGTCTCTGGGAATTCGTCCAACTCTCTGCATCTTCCGGAGTCATGCTCTGCTTGGAGAACTGGTACTACAAAATACTTATACTGATGACTGGAAATCTACATAGTGCTGCAATTGCTGTGGACGCTTTGTCTATATGCATGACAATTAATTCATGGGAGTTGATGATTCCTTTGGCATTCTTTGCTGCAACTGGAGTGAGAGTTGGAAACGAACTTGGAGCTGGCAATGGCAAAGGAGCCAAATTTGCCACAATAGTGTCAGCAATGACTTCATTAGTCATTGGCCTCTTTTTATGGCTTCTGGTAATACTTTTCCATGGTAAACTTGGTTACATATTCTCTACAAGCCAACCTGTCCTTGAAGAGGTAAACAAGCTATCCGTCCTCTTGGCCTTCACAATTCTTCTCAACAGTGTTCAGCCAGTTCTATCTGGTGTGGCTGTTGGCTCAGGTTGGCAATCGTATGTGTCATACGTAAACTTGGGATGCTACTACCTTATTGGCATACCTCTTGGGTTTCTAATGGGATGGGTGTTTCATCTTGGAGTTATGGGAATCTGGGCAGGAATGATATTCGGTGGCACAGCAACTCAGACCTTGATTTTGACGATCATCACAATGCGAAGCGATTGGGAGAAGGAGGCTGAGAAAGCAAGCATGCGCGTAGGAAAGTGGTCGGAGACGCGAGAGTCAAATTAA 2898 0.4431 MAGDTGATTLDEAKAPLLGSNSSVIGLKHEYEDESLSRRVWIESKKLWHIVGPAIFSRIASYSMLVITQAFAGHLGDLELAAISIANNVIVGFDFGLLLGMASALETLCGQAFGAKKFYMLGVYMQRSWIVLFLCCVLLLPMYLFASPVLKLLGQPTDVAELSGLVSVWLIPLHFSFAFQFPLQRFLQCQLKTGIIAWVSLVSLIAHVLISWLFVSKFQLGVIGTAATINFSWWVCTLGLLGYTVYGGCPETWTGFSTEAFSGLWEFLKLSASSGVMLCLENWYYRILILMTGNLENAKIAVDALSICMTINGWELMIPLAFFAAAGVRVANELGAGNGKGAKFATTVAVMTSIVIGLFFWLLIILFNGKFGYIFSSSEVVLQEVKKLSVLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYLIGVPFGFLMGWVFHLGVMGIWGGMIFGGTATQTLILAIITIRCDWDKEVIHITSELKTPLFEGSPTRIESKYEHEAEAFTRRVWIESKKLWQIVGPAIFSRIASYSMIVITQAFAGHLGDVELAAITIANIVLVGFDYGLLLGMASALETLCGQAFGAKKFYMLGVYMQRSWIVLFLCCVLLLPLYLFATPILKLLGQPPDVAELAGMVTVWLIPLHFSFAFQFPLQRFLQCQLKNAVTAWVSLVALAVHVFISWLFVYKLKLGVIGAAATINFSWWVLVFGLLGYTVYGGCPQTWTGFSIEAFSGLWEFVQLSASSGVMLCLENWYYKILILMTGNLHSAAIAVDALSICMTINSWELMIPLAFFAATGVRVGNELGAGNGKGAKFATIVSAMTSLVIGLFLWLLVILFHGKLGYIFSTSQPVLEEVNKLSVLLAFTILLNSVQPVLSGVAVGSGWQSYVSYVNLGCYYLIGIPLGFLMGWVFHLGVMGIWAGMIFGGTATQTLILTIITMRSDWEKEAEKASMRVGKWSETRESN* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00716 965 NCBIfam MATE family efflux transporter 53 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 NCBIfam MATE family efflux transporter 524 920 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 Pfam MatE 276 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 Pfam MatE 524 684 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 Pfam MatE 747 907 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte12g00716 965 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 473 - -
Pte12g00716 965 CDD MATE_eukaryotic 514 950 IPR045069 GO:0042910|GO:1990961
Pte12g00716 965 CDD MATE_eukaryotic 43 477 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00716 Pte-Chr12 7312795 7321728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00716 K03327 - qsa:O6P43_025232 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00716 12 7312795 7321728 Pte12g00716 12 7312795 7321728 RCT