Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00620 ATGAGTAAAAGCAAAGTTCTTGTAGTAGGGGCTACTGGGTATATTGGCAAGAGGATAGTGAAGGCGAGTCTTGCACAGGGCCATGTGACCTACGTGATTCATAGGCCAGAGGTTGGCCTTGACATTGATAAGATTCAAATGCTATTATCATTCAAGAAGGAAGGTGCTCGCCTTATTGAGGCCTCATTCTCAGATCATCAGAGTCTGGTTGACGCAGTAAAACAAGTGGATGTCGTGATTTGCACCATGTCTGGGGTTCATTTCCGCAGCCACAATCTATTGTTGCAGCTCAAACTTGTGGACGCCATTAAAGATGCTGGAAACATTAAGCGGTTCCTTCCTTCTGAGTTTGGAATGGATCCAGCAAGAATGGGAGATGCACTTGAACCTGGCAGAGTAACATTTGATGAGAAAATGACAGTGAGAAAGGCAATAGAAGATGCCAAGATCCCTTACACTTACATTTCATCAAACTGTTTTGCTGGATACTTCGCTGGAAATCTTTCTCAGATGGGGACACTTGTTCCTCCAAGGGATAAAGTTTTTCTTTATGGAGATGGAAACATCAAAGCTGTTTTCGTAGATGAAGATGATGTAGCAACGTACACAATCAAGACGATAGATGATCCTAGGACATTGAACAAGACAGTGTACATTAGGCCCCCAGAGAACATTCTCTCCCAAAGAGAGCTTGTAGAGACTTGGGAGCAAATCAGTGGGAAAACATTGGAAAAGGTCAACATCTCCCCAGAGGATTTCCTATCCAAAATGAAAGATTTGGACTACGTAAGCCAAGTGGCTGTGGGGCATTTCTATCATATTTTCTATGAGGGGTGCTTGACAAATTTTGATATAGGGGAAGGTGCTGAAGAAGCATCCAAGCTTTATCCAGAAGTGAACTATACAAGTATGGATGAATATATGAAAATCTATGTTTAA 939 0.4217 MSKSKVLVVGATGYIGKRIVKASLAQGHVTYVIHRPEVGLDIDKIQMLLSFKKEGARLIEASFSDHQSLVDAVKQVDVVICTMSGVHFRSHNLLLQLKLVDAIKDAGNIKRFLPSEFGMDPARMGDALEPGRVTFDEKMTVRKAIEDAKIPYTYISSNCFAGYFAGNLSQMGTLVPPRDKVFLYGDGNIKAVFVDEDDVATYTIKTIDDPRTLNKTVYIRPPENILSQRELVETWEQISGKTLEKVNISPEDFLSKMKDLDYVSQVAVGHFYHIFYEGCLTNFDIGEGAEEASKLYPEVNYTSMDEYMKIYV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00620 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 258 IPR036291 -
Pte12g00620 312 Gene3D - 158 308 - -
Pte12g00620 312 Pfam NmrA-like family 6 274 IPR008030 -
Pte12g00620 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Pte12g00620 312 Gene3D - 4 297 - -
Pte12g00620 312 PANTHER PINORESINOL REDUCTASE-RELATED 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00620 Pte-Chr12 5645078 5646615 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00620 K21568 - qsa:O6P43_025080 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00620 12 5645078 5646615 Pte12g00620 12 5645078 5646615 RCT