Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00610 ATGGGGGAGGACAACAGAGCTGAGTATATAGCTATTGGAGATACATCAATCCCAAGGGGACATAGCGTGAGGAAAGTTTCAGTTTTACCTCTTGTTTTTCTCATTTTCTATGAGGTATCTGGGGGTCCTTTTGGGATTGAAGACAGTGTGAGAGCAGCTGGTCCTCTGCTGTCCCTACTTGGTTTCATAGTTCTGGCGCTTATATGGAGTGTTCCTGAGACGTTGATTACTGCCGAGATGGGTACTATGTTTCCCGAAAATGGGGGTTACGTTGTTTGGGTTGCATCCGCATTGGGTCCTTATTGGGGTTTTCAGCAAGGTTGGATGAAATGGCTTAGTGGGGTAATTGATAACGCCCTATACCCGGTTATGTTTCTCGATTACCTCCAGTCAGGAATCCCTGCTTTCGGGGATGGTGTACCACGAAGAATTGCAGTATGGGTTTTGACTGCAATCCTTACTTATATGAATTACCGGGGTTTGACTATAGTGGGATGGGTTGCTGTTGTCTTAGGTGTTTTCTCGATATTCCCCTTTGTGGTAATGGGAATTGTGTCAATCCCCAAGTTGGAGCCTTCGAGATGGTTCGTCGTTGATGTTCAGCGTGTGAACTGGAATTTATATTTGAACACCCTCTTCTGGAATCTTAACTACTGGGATTCTATAAGTACTCTTGCTGGTGAAGTGGAAAACCCAAAGAAAACTCTCCCAAAGTCTATGCGTTATGCTTTGATATTGGTTGTTCTTGGTTATTTCTTTCCACTTTTAATTGGTACTGGGGCAGTTCCACTCGATCGCGAGCTGTGGAGGGATGGGTATTTTTCCGATATTGCTAAATTCATTGGAGGTGCTTGGTTAAGCTGGTGGATCCAATCAGCTGCTGCCTTGTCAAATATGGGAATGTTTGTCGCTGAGATGAGCAGCGACTCGTTCCAGCTATTAGGAATGGCTGAGAGGGGTATGTTGCCTGAGTTCTTTGCCAAGAGGTCTGCTCATGGAACCCCACTTGTAGGTATACTATTCTCAGCTTCTGGTGTACTTCTGCTCTCATGGCTAAGTTTTCAGGAGATTGTAGCTGCAGAAAATTTTCTCTACTGCTTTGGAATGATTTTGGAGTTCATAGCATTTGTGTGGTTAAGGATCAAACAACCTGCTGCACCTCGCCCATACAAGGTGCCTGGGGGTACAACTTGTGCCATTGTCATGTGCATCCCACCCACTGTGTTAATATGTGTTGTATTGGCACTTTCCTCCCTCAAAATCATGGTTATAAGCCTCATTGCTGTGGCTATTGGTCTTGTGTTGCAGCCCTCTGTCAAGTATATCGAGAAAAGGGGATGGATGAAGTTTTCCATCAGTTCTGATCTCCCAGATCTTGACAATGGAGAGTGA 1392 0.4497 MGEDNRAEYIAIGDTSIPRGHSVRKVSVLPLVFLIFYEVSGGPFGIEDSVRAAGPLLSLLGFIVLALIWSVPETLITAEMGTMFPENGGYVVWVASALGPYWGFQQGWMKWLSGVIDNALYPVMFLDYLQSGIPAFGDGVPRRIAVWVLTAILTYMNYRGLTIVGWVAVVLGVFSIFPFVVMGIVSIPKLEPSRWFVVDVQRVNWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKSMRYALILVVLGYFFPLLIGTGAVPLDRELWRDGYFSDIAKFIGGAWLSWWIQSAAALSNMGMFVAEMSSDSFQLLGMAERGMLPEFFAKRSAHGTPLVGILFSASGVLLLSWLSFQEIVAAENFLYCFGMILEFIAFVWLRIKQPAAPRPYKVPGGTTCAIVMCIPPTVLICVVLALSSLKIMVISLIAVAIGLVLQPSVKYIEKRGWMKFSISSDLPDLDNGE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00610 463 Gene3D Amino acid/polyamine transporter I 23 448 - -
Pte12g00610 463 PIRSF AA_transporter 16 461 - -
Pte12g00610 463 PANTHER POLYAMINE TRANSPORTER PUT1 20 461 IPR044566 GO:0022857
Pte12g00610 463 FunFam Amino acid permease, putative 22 451 - -
Pte12g00610 463 Pfam Amino acid permease 32 431 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00610 Pte-Chr12 5531097 5533456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00610 3 461 Organic Solute Cotransporters AT1G31830 71.983 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00610 - - qsa:O6P43_025058 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00610 12 5531097 5533456 Pte12g00610 12 5531097 5533456 RCT