Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00607 ATGACGATGTTCGCTATGGTGATGAGACAGAGCAGCAAAAAGTTTTCAACTACAGCACGCATGCAAGTGTTCTGTACTGCTTCAACTGCCGTTACCAATGAGTTTGTATTAGCAACAGCAGCAACAATAAGCAAACGTGTTGGTGGACATGCTGGTAGTTCCAGTACCGCCTTGGGCTTCTGGGTTACAGGTCCTACAGTAGTTTATGGCAACGTGAGGCATCAAAGCACTGTGACTCTCAAAGAGAAAGATCACCGAGGGGAGGTGACAAAGGTCCAGTCCTCTCCTTTAAGCAATGAAAAAGGTTGTGAGAATAAAGATGTGAAAGGAGTTGCGAGTTACTGGGGTATGGAAGCACCCAAGGTCACCAAAACTGATGGTACTGAATGGAAATGGAACTGCTTTAGGCCGTGGGAGACATACAAAGCAGATCTTTCTATTGATCTCAACAAACATCATAAGCCACTGACATTCATGGACAAATTGGCTTATTGGACTGTCAAGTCTCTGAGAGTCCCCACTGACTTGTTCTTCCAGAAGCGCTATGGTTGCCGTGCTATGATGCTGGAGACAGTGGCAGCAGTCCCAGGCATGGTAGGAGGCATGCTGCTACACTGCAAATCTCTCAGAAGATTCGAACCCAGCGGCGGTTGGATCAAAGCACTGCTGGAAGAAGCTGAGAATGAAAGGATGCATCTGATGACATTCATGGAAGTAGCCAAGCCCAGATGGTATGAGCGTGCATTGGTGTTTGCAGTCCAAGGTGTATTCTTCAATGCATACTTCTTAGCCTACATTCTGTCACCCAAGTTTGCTCACCGCATGGTTGGATATCTTGAAGAGGAAGCCATTCACTCGTATACCCAATATCTAAAGGAGCTTGACAATGGCAACATTACCAATGTACCTGCTCCTGCAATCGCCATTGACTACTGGCAGATGCCGACAAACTCTACATTGCGAGATGTTGTGGTGATTGTGAGAGCGGATGAGGCTCACCACCGTGATGTCAACCACTTTGCATCGGATATTCATTGTCAAGGACGTGAACTGAAAGAAGCCCCAGCACCACTTGGTTATCACTAA 1086 0.4678 MTMFAMVMRQSSKKFSTTARMQVFCTASTAVTNEFVLATAATISKRVGGHAGSSSTALGFWVTGPTVVYGNVRHQSTVTLKEKDHRGEVTKVQSSPLSNEKGCENKDVKGVASYWGMEAPKVTKTDGTEWKWNCFRPWETYKADLSIDLNKHHKPLTFMDKLAYWTVKSLRVPTDLFFQKRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEPSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALVFAVQGVFFNAYFLAYILSPKFAHRMVGYLEEEAIHSYTQYLKELDNGNITNVPAPAIAIDYWQMPTNSTLRDVVVIVRADEAHHRDVNHFASDIHCQGRELKEAPAPLGYH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00607 361 Gene3D Alternative oxidase 113 358 IPR038659 -
Pte12g00607 361 PANTHER ALTERNATIVE OXIDASE 9 361 IPR002680 GO:0009916
Pte12g00607 361 CDD AOX 178 345 IPR002680 GO:0009916
Pte12g00607 361 PIRSF AO 1 357 IPR002680 GO:0009916
Pte12g00607 361 Pfam Alternative oxidase 151 341 IPR002680 GO:0009916
Pte12g00607 361 FunFam Ubiquinol oxidase 114 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00607 Pte-Chr12 5502770 5504685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00607 10 362 Miscellaneous Gene Families AT3G22370 67.967 3.55e-180 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00607 K17893 - qsa:O6P43_033430 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00607 12 5502770 5504685 Pte12g00607 12 5502770 5504685 RCT