Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00603 ATGGCGGCCGTATTGCCTTCGCTGACCGCACCTTCACTTTACCAACAATATCACCGTCCTCGGTTCATAAACCCTAACCACAACTTACTTCTGATTCATCGCTCTACCAGATCCTTTATCTACTTCCGTAGCTCCATCTTCCATTTCTTCGTTGACCGGAATACAATTCTTTCTTCTCTGACTGCTCAGAGCAGCGACCGATCTTGTCCTCAGTCCAGCGATTCTCTGAAGCTGCCTCAGACATTCTTTCGCCTCGCTTTCTCCACTATCTTGTTTATCGGATGTGGCCTTTGCTTCAATATTCGTCTTGGTTCAGCCACTCCAGCTCAGCTTCCTCCTTCTGGCACAGCTGATTCTTTACCTATACAAGCTAAGGAGGACCGGATTGTTCAAGATGATCTGGATAATAAAAAACACGAGAAAATGGAAAATCGTGAGGATGAAGAATTGGAAGCAGAGTTCAATGAATGGAAGTCTAAAACTTATGCTTTGACTGTGCCATTGAATATTGTTGCTCTGCGTGGCTCAATTCCTCCATCATGGATCAAGGACTTCATAAAATCTCAAGGAAGGAGATTAAAATTTGTACTCAAGCTTCAAGGGACCCTTGAAAGTATTTTTAGCGATCTGTCAGTGGCCATCACAAAAGGTAATATCAAACCAACATCTACTTTGGCAGCAGATGCGGTGACAATTGGTGATTCTTGGCTCAAACTCACTATTAAAAAGGGTGTAATTGAGCCAATACAGGGGGCAGAAGAGCAAGATTGGTTTAAAGGTTTGGACGAGAAGTGGAAGGTTTATTTGCGCAGGAACAATGAGGGTGAAATAGATGTTAATGGTCAAATATGGGGTGCTCCGTATCGTTGGGGATGCATGGTAATAGCATACAAGAAAAGCAAATTCAAAAAGCATAACTTTGCTCCTATAGAGGACTGGGCAGATCTATGGCGGCCAGAACTTGAAGGGAGGATTTCAATGATTGATTCTCCAAGGGAGGTTGTTGGTACGGTGTTGAAGTACATGGGAGCTTCATACAATACAACTGACATCAACTTGCAAGTTGCAGGAGGGAGAGAAGCTGTAAAACGTAATCTGTCTTCACTGAGGAAACAGGTGAGGCTGTTTGACAACATTCACTATTTAAAAGCATTTGGAATTGGGGATACTTGGGTTGCTGTAGGTTGGAGCAGTGACGTCATTCCCATCGCCAAGCGTATGTCTAATGTAGCAGTAATTGTACCGAAGTCTGGAACTAGCCTCTGGGCAGATCTTTGGGCGGTTCCTGCTTGCTCTAAAATTGAAGCACCCCAACTAGGTGGGCGAGTTAGGGGGCCCTCTCCTGCCATCCATCAATGGATAGAGTTCTGTTTGCAACCTGCAAGAGCCCTCCCTTTTCAACTGGAAACTGTTCCTGGTTCTTCTCCTTCTGCCATTCAAGCTTCTTCCCTCCAAGTTCCTTTGGAGCTCAAACATAACAAGGTGAAGCTGGATTCAAATCTTGTATTTGGAACAGTACCTACTGATATTCTAGAAAGATGTGAATTCCTGGAGCCATTGTCAAATTCGGCATTGTCAGATTATAACTGGTTGATTACCAGTATGGAGGTAACTAGCCGTGGCATGATGGAGAGAATGCTTGGATATATTTCTCCGGGGAAAAGGGATATTAAGTAA 1677 0.4401 MAAVLPSLTAPSLYQQYHRPRFINPNHNLLLIHRSTRSFIYFRSSIFHFFVDRNTILSSLTAQSSDRSCPQSSDSLKLPQTFFRLAFSTILFIGCGLCFNIRLGSATPAQLPPSGTADSLPIQAKEDRIVQDDLDNKKHEKMENREDEELEAEFNEWKSKTYALTVPLNIVALRGSIPPSWIKDFIKSQGRRLKFVLKLQGTLESIFSDLSVAITKGNIKPTSTLAADAVTIGDSWLKLTIKKGVIEPIQGAEEQDWFKGLDEKWKVYLRRNNEGEIDVNGQIWGAPYRWGCMVIAYKKSKFKKHNFAPIEDWADLWRPELEGRISMIDSPREVVGTVLKYMGASYNTTDINLQVAGGREAVKRNLSSLRKQVRLFDNIHYLKAFGIGDTWVAVGWSSDVIPIAKRMSNVAVIVPKSGTSLWADLWAVPACSKIEAPQLGGRVRGPSPAIHQWIEFCLQPARALPFQLETVPGSSPSAIQASSLQVPLELKHNKVKLDSNLVFGTVPTDILERCEFLEPLSNSALSDYNWLITSMEVTSRGMMERMLGYISPGKRDIK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00603 558 Coils Coil 131 151 - -
Pte12g00603 558 Gene3D - 291 422 - -
Pte12g00603 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 282 298 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pte12g00603 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 311 325 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pte12g00603 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 415 434 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pte12g00603 558 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 329 348 IPR001188 GO:0015846|GO:0019808|GO:0042597
Pte12g00603 558 Pfam Bacterial extracellular solute-binding protein 230 470 - -
Pte12g00603 558 CDD PBP2_PotD_PotF_like_1 167 533 - -
Pte12g00603 558 Gene3D - 177 464 - -
Pte12g00603 558 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 82 535 - -
Pte12g00603 558 SUPERFAMILY Periplasmic binding protein-like II 168 466 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00603 - - qsa:O6P43_033436 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00603 12 5459688 5465458 Pte12g00603 12 5459688 5465458 RCT