Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00593 ATGGAGCAATTGAAGACGATCGGTAGAGAGCTGGCTATGGGTTCCCAAGGTGGCTTTGGCCAATCCAAGGAGTTTCTCGATCTTGTCAAGTCAATTGGGGAAGCTCGATCCAAAGCCGAAGAGGATCGAATTGTCCTCCACGAGATCGAAACCCTCAAACGACGTATTACCGAACCTGATATCCCTAAACGGAAGATGAAGGAGTACATTATCCGACTCGTCTATGTTGAGATGCTTGGACACGACGCGTCTTTTGGTTACATTCATGCCGTCAAGATGACGCATGACGACAATCTCCTCCTCAAACGAACTGGTTATCTTGCAGTCACGCTTTTCTTGAATGAAGACCATGACTTAATCATCCTTATTGTTAATACGATCCAGAAGGACCTTAAGTCTGATAACTACCTCGTTGTTGGTTCTGCACTTAATGCCGTTTGTAAATTGATCAATGAGGAGACGATACCAGCTGTGTTGCCCCAGGTGGTGGAATTACTGGGTCATTCTAAAGAGGCAGTGAGGAAGAAGGCAATCATGGCACTTCATCGGTTTTATCAGAAATCGCCGTCTTCAGTCTCACATTTGATCTCTAATTTTAGAAAGAGGCTGTGTGACAATGATCCTGGAGTAATGGGCGCCACGCTTTGTCCTTTGTTTGATCTAATCACCTTTGATGTGAATTCTTTTAAGGATCTGGTAGTAAGCTTTGTAAGCATTCTTAAGCAAGTAGCAGAACGGCGATTACCCAAGAGTTACGATTATCACCAAATGCCAGCTCCGTTCATCCAGGTTAAGTTGCTGAAAATACTAGCATTGCTGGGTAGCGGAGACAAGCAAGCAAGTGAAAATATGTACACTGTTGTTGGTGAGATTATCAGGAAGTGCGATTCGACAACCAACATAGGAAATGCCATTCTCTATGAGAGCGTTTGCTGTGTCTCTTCAATATATCCCAATCCGAAATTGTTAGAAGCTGCAGCCGACGTTATTGCAAAATTTTTGAAGAGTGATACTCACAATCTTAAATATATGGGTATCGATGCCCTTGCTCGGCTCATGAGGATACATCCAGAGATTGCTGAACAACATCAACTGGCTGTCATTGATTGCCTAGAGGATCCGGATGATACTCTCAAGCGGAAGACATTTGAACTGTTGTACAAAATGACCAAGTCATCCAATGTTGAAGTGATTGTGGAACGTATGATTGATTACATGATAAGTATTAATGATAGCCATTATAAAACCTATATTGCTTCTCGATGTGTAGAACTTGCTGAGCAGTTTGCACCAAGTAATCAGTGGTTCATACAGACCATGAATAAAGTCTTTGAACATGCAGGAGATCTTGTGAATATTAAGGTGGCTCATAACCTGATGCGGTTGATTGCCGAGGGATTCGGAGAGGATGATGACACAGCAGATAGCCAGCTAAGATCATCTGCTGTTGAGTCATATTTGCGCATTCTGGATGAGCCGAAGCTTTCTTCTACATTTCTTCAAGTCATATGTTGGGTTCTTGGAGAATATGGGACGTCTGACAAAAAATACTCTGCTTCCTATATTAGTGGGAAGTTATATGATGTTGCAGAGACTTATTCTAATGATGAAACTGTTAAGGGTTATGCAATCACAGCAATCATGAAAATTTGTGCATTCGAAATAGCTGCAGGGAGCAAAGTCGATATGTTACCTGAGTGTCAATCATTAATTGAAGAGTTATCTGCCTCACACTCAACGGACTTGCAGCAACGTGCATATGAATTGCAAGCACTTGTTAGTTTGGATGCGGGTGCCATTAAGTGTGTAATGTCCCCAGATGCTAGTGGCAAAGAAATTGAGATTGATAAGAACCTATCGTTCCTTGATTCTTATGTCCAAAAAGCACTGGAAAATGGTGCCCAGCTGTACATTCCTGAGAATGAGCGGACTGGTATGTTAGATATCGGTGTCTTGAGAAGCCAAGATCAACAAGAACCATCTATGCATGGTCTTAGATTTGAAGCATACGAGCTTCCAAAACCTCCTGTGCCATCTGGCGTTCCTTCATCCTCATTTGCATCCTCATCGGAACTTGTCCCCGTAACTGAGCCCTCTTATATGAGGGAAACTCACCAGGTTTCTTTAGCAACATCTGCATCAGATTCAGGATCATCAGAACTCAAGCTTCGACTTGATGGTGTTCAAAGAAAGTGGGGCCGGCCGACATACACCTCGTCAACACCAACTACCTCGACCACAAATCCAACTACTCAAAAGCCTCTGAATGGGGTCACTCAAGGGGATAGTACAAGTCCTCCTGCTTCAAAACCACGTGATAGTTATGATTCAAGAAAGCCACCAGTTGAAATTGATCCAGAGAAGCAGAAGCTCGCTGCTACATTATTTGGGGGTATATCAAAACCTCAACAAAAAACTCTTGCTAACCAGAGGGTGTCAAAGGCAAGCGGTAATGGAGTTGACAGTTCTCAAGGTTCAAAGAAGGCAGCTGTATCCACTGAATTACCTACAAAGAAAGCAAATCTACAACCTCCTCCAGATTTGCTGGACTTGAGCGAGCCTAGTATTACTAGTAGTGCTCCTTCTGTTGACCCCTTCAAACAATTAGAAGGGCTTCTGGATCCTAGTGAGGTTGCTCCAACTGTGAATCCAGTTCCACCTCCAGTTTCTACAGCAGTTGATATCATGACGCTTTATGGTGAGACGACTTCAAGTGGCCTAGTTAGCAATAGTGACTACTCTATTCCCTCAAGTGAGGATAATTTTGATATTTTTTCTGGAATGTCAACCGCTACTACAAGCATCACCGATGATGAAAAAACTGGAACAGCTCCATCACTGTTAAAAGGTCCAAATGCTAAAGATGCATTGCAAAAGGATGCACTTGTGAGGCAGATGGGCGTGAACCCATCAAGTCAGAATCCGAACTTATTCAAAGACTTGCTTGGCTAG 2952 0.4306 MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRITEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVGSALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITFDVNSFKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQVKLLKILALLGSGDKQASENMYTVVGEIIRKCDSTTNIGNAILYESVCCVSSIYPNPKLLEAAADVIAKFLKSDTHNLKYMGIDALARLMRIHPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVERMIDYMISINDSHYKTYIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDTADSQLRSSAVESYLRILDEPKLSSTFLQVICWVLGEYGTSDKKYSASYISGKLYDVAETYSNDETVKGYAITAIMKICAFEIAAGSKVDMLPECQSLIEELSASHSTDLQQRAYELQALVSLDAGAIKCVMSPDASGKEIEIDKNLSFLDSYVQKALENGAQLYIPENERTGMLDIGVLRSQDQQEPSMHGLRFEAYELPKPPVPSGVPSSSFASSSELVPVTEPSYMRETHQVSLATSASDSGSSELKLRLDGVQRKWGRPTYTSSTPTTSTTNPTTQKPLNGVTQGDSTSPPASKPRDSYDSRKPPVEIDPEKQKLAATLFGGISKPQQKTLANQRVSKASGNGVDSSQGSKKAAVSTELPTKKANLQPPPDLLDLSEPSITSSAPSVDPFKQLEGLLDPSEVAPTVNPVPPPVSTAVDIMTLYGETTSSGLVSNSDYSIPSSEDNFDIFSGMSTATTSITDDEKTGTAPSLLKGPNAKDALQKDALVRQMGVNPSSQNPNLFKDLLG* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00593 983 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 27 814 - -
Pte12g00593 983 MobiDBLite consensus disorder prediction 796 867 - -
Pte12g00593 983 Pfam Adaptin N terminal region 54 595 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pte12g00593 983 SUPERFAMILY ARM repeat 22 597 IPR016024 -
Pte12g00593 983 PIRSF AP4_epsilon 696 840 IPR017109 GO:0015031|GO:0030124
Pte12g00593 983 PIRSF AP4_epsilon 909 983 IPR017109 GO:0015031|GO:0030124
Pte12g00593 983 PIRSF AP4_epsilon 11 680 IPR017109 GO:0015031|GO:0030124
Pte12g00593 983 MobiDBLite consensus disorder prediction 799 839 - -
Pte12g00593 983 MobiDBLite consensus disorder prediction 733 771 - -
Pte12g00593 983 Gene3D - 12 606 IPR011989 -
Pte12g00593 983 MobiDBLite consensus disorder prediction 704 719 - -
Pte12g00593 983 MobiDBLite consensus disorder prediction 704 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00593 Pte-Chr12 5325721 5332295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00593 K12400 - qsa:O6P43_033456 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00593 12 5325721 5332295 Pte12g00593 12 5325721 5332295 RCT