Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00584 ATGGTCTCTAACTCCATTATTTTCAGAACAGTACCACCTGCGGCTTCCGCTAAACCTCCTCATGTTCCTGTTCTTAACATATCCTCTGTCAGAATCGAAGAAAACCCCCAAACTGAAACTCCAAGAAGAAAAACAAATCCAATCACCCCTACCAAGCAAACATTGCCTAATAACACTTCCCACCCCTACACTGCCAATGTAAAAGCATTAACACAACCAGTGGGGAACAAATATCCTACCAGCAGCACAAAGAAAAGAGCAGAACCTTCATTACCTATTGTCATCTTCAATGCATTAGATGACATCATTAACAAGTTCGTAGATCCACCACTGAAACCTTCAGTTGATCCAAGACATGTCCTGTCCAAAAATTTTGCTCCTGTTGATGAGCTTCCCCCCACAGATTGTGAAATCATTCAAGGCTCACTACCACCATGTCTAAATGGAGCCTACATCAGAAACGGTCCAAACCCTCAATACCTTCCCCGTGGACCTTACCATCTTTTCGATGGTGATGGCATGCTTCACTGCATCCGTATTTCTCAAGGCAGAGCAACTCTCTGCAGCCGCTATGTTAAGACTTACAAATACAAAATTGAAAACGAGGCCGGTTGCTCACTTCTACCTAATGTATTCTCAGGCTTCAATGGCCTTGTTCCCTCTGCAGCAAGAGGTGCTGTCACTGCTGCACGAGTCGTCACCGGTCAGTACAACCCTGTCAATGGCATTGGCTTGGCGAACACAAGCTTAGCTTTCTTCGGTAACAAGCTATACGCACTTGGAGAGTCTGACCTTCCTTACATAATCAAGCTAACCTCCAATGGTGATGTTGAGACTGCAGGTCGTCATGACTTTGATGGTAAGCTTTGGATGAGCATGACTGCTCATCCAAAGATAGACCCCGAAACAGGTGAGGCCTTTGCTTTTCGGTACGGTCCAGCTCCACCATTTCTCACCTACTTTCACTTCGATTCAAATGGTAAGAAAAAAACAGACGTGCCAATCTTCTCCATGGTCCGACCTTCTTTACTTCACGACTTTGCTATTACAAGAAAATATGCCATCTTCGCTGACATTCAAATCGGAATGAACCCCATGGACATGTTATTCAACGGTGGCTCTCCTGTAGGATCAGACTCGACAAAAGTTCCAAGACTCGGCGTCCTCCCTCGTTATGCAACAGACGAGTCTGAAATGACATGGTTTGACGTGCCAGGGTTCAACATCATACACGCCATTAATGCATGGGATGAAGATGAAGGCAACACCATAGTTCTCATAGCACCAAATATCATGTCAGTAGAGCACACACTTGACAGAATGGACTTAGTTCATGCTTTGGTAGAGAAAGTGAAGATCGACCTCAAGACTGGGATTGTCTCAAGGTGTCCCATCTCTGCAAGAAATCTTGACTTTGCTGTGTTGAATCCAGCGTATCTGGGGAAGAAGAACAAGTATGTCTACGCTGCAGTAGGTGATCCCATGCCGAAGATTTCTGGCGTGGTAAAGCTTGATGTATCAAAAGGGGATGAGCGCAAGGATTGTACAGTTGCTGCAAGGATGTACGGTCCAGGTTGCTATGGTGGTGAGCCATTTTTTGTGGCAAGGAAACCAAAGGATCCTAACGCTGAGGAGGATGATGGGTATGTGGTTTCATATGTGCATGATGAGAATTCAGATGAGTCGTGGTTCTTGGTGATGGATGCAAAGTCACCGGAGCTTGAAATTGTGGCAAAAGTGAAGCTGCCGGGGAGAGTACCCTATGGGTTTCATGGTCTTTTTGTGAGTGAAAGTGACATTAGAAAAACACAAACTGTGAATTCAGATACGGATAAGCTGCCGACGATGATTGATGTGTATGCATGA 1866 0.4518 MVSNSIIFRTVPPAASAKPPHVPVLNISSVRIEENPQTETPRRKTNPITPTKQTLPNNTSHPYTANVKALTQPVGNKYPTSSTKKRAEPSLPIVIFNALDDIINKFVDPPLKPSVDPRHVLSKNFAPVDELPPTDCEIIQGSLPPCLNGAYIRNGPNPQYLPRGPYHLFDGDGMLHCIRISQGRATLCSRYVKTYKYKIENEAGCSLLPNVFSGFNGLVPSAARGAVTAARVVTGQYNPVNGIGLANTSLAFFGNKLYALGESDLPYIIKLTSNGDVETAGRHDFDGKLWMSMTAHPKIDPETGEAFAFRYGPAPPFLTYFHFDSNGKKKTDVPIFSMVRPSLLHDFAITRKYAIFADIQIGMNPMDMLFNGGSPVGSDSTKVPRLGVLPRYATDESEMTWFDVPGFNIIHAINAWDEDEGNTIVLIAPNIMSVEHTLDRMDLVHALVEKVKIDLKTGIVSRCPISARNLDFAVLNPAYLGKKNKYVYAAVGDPMPKISGVVKLDVSKGDERKDCTVAARMYGPGCYGGEPFFVARKPKDPNAEEDDGYVVSYVHDENSDESWFLVMDAKSPELEIVAKVKLPGRVPYGFHGLFVSESDIRKTQTVNSDTDKLPTMIDVYA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00584 621 Pfam Retinal pigment epithelial membrane protein 127 596 IPR004294 GO:0016702
Pte12g00584 621 PANTHER BETA-CAROTENE DIOXYGENASE 128 596 IPR004294 GO:0016702
Pte12g00584 621 MobiDBLite consensus disorder prediction 32 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00584 Pte-Chr12 5229442 5231307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00584 K09840 - qsa:O6P43_033470 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00584 12 5229442 5231307 Pte12g00584 12 5229442 5231307 RCT