Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00563 ATGGTATTTGCAAAAGAAGCAGGTTCATCTTCTTATTCACTACCTCCATATCCCCGAGAAGACACACCTCTTCTTTCCAAGGCACCACCGCTCTCTTCGAGACTCAAGACTTTTGCGAACGTTTTCATCGCTGTTGTCGGAGCAGGCGTACTGGGTCTTCCTTATGCCTTCAAGAAAACGGGTTGGATATGTGGATTGCTCTTGCTTTTCTCAGTGGCTTTCTTCACCTACTACTGCATGATGCTCTTGGTCTACTCTCGCCGCAAGCTTGAATCCCTCGTGGGGTTCGCTAAGATAAACTCTTTCGGTGATTTGGGATACACCATTTGCGGACCTATTGGAAGATTCGCTGTTGATTTGATGATCGTACTAGCGCAAGCTGGGTTTTGCATTAGCTACCTGATTTTTATCGGTAACACTTTAGCTTATCTTATTAACTTTGACAATAGCCGGGCTAGAATTCTGGGCATGACGCCCAAAGCTCTGTACATATGGAGTTGTTTCCCTTTTCAATTGGGTTTGAATTCGATTCCCACTCTGACCCATTTAGCTCCTCTGAGTATTTTCGCTGACGTTGTTGATATTGGCGCCATGGGAGTTGTGATGGTGGAGGATGTTGCTCTTGCCGTTAAAAACAGACCTGTCCTAGAGACTTTTGGTGGGTTCTCTGTGTTGTTTTATGGTTTAGGTGTGGCTGTCTATGCATTTGAAGGAATTGGGATGGTTTTGCCATTGGAATCTGAGGCTAAAGATAAAGATAAGTTTGGCAAAGTTTTAGCTTTGTGTATGACATTCATCTCTATCTTGTATGGAGCATTTGGTGCTTTGGGTTATTTTGCTTTTGGTGAAGAAACCAAAGACATAATCACAACCAATTTTGGACAAGGTCTGCTTAGCACCGTGGTACAAATAGGTCTCTGTGTAAACCTTTTCTTCACTTTTCCATTGATGATGAACCCCGTGTATGAAGTAGTGGAGAGGCGCCTCTGTGACTCTAGATACTCCTTGTGGCTGAGATGGTTAGTTGTGTTGTTGGTGAGTTTGGTGGCTCTTACAGTGCCTAATTTTGCAGATTTCTTATCTTTGGTCGGAAGCAGTGTCTGTGTTATTCTAAGCTTTGTATTTCCTTCAGTCTTTCACTACATGGTTTTCAAGGATGAGCTGAATTGGAATGGGGTACTTGTGGATTGGGTAATAGCATTTGTGGGGATTGTCATTGCAGTTTCTGGAACCGGGTCTTCCCTTCTGGAAATTCTTGCTCCAAAGGCCTAA 1272 0.4355 MVFAKEAGSSSYSLPPYPREDTPLLSKAPPLSSRLKTFANVFIAVVGAGVLGLPYAFKKTGWICGLLLLFSVAFFTYYCMMLLVYSRRKLESLVGFAKINSFGDLGYTICGPIGRFAVDLMIVLAQAGFCISYLIFIGNTLAYLINFDNSRARILGMTPKALYIWSCFPFQLGLNSIPTLTHLAPLSIFADVVDIGAMGVVMVEDVALAVKNRPVLETFGGFSVLFYGLGVAVYAFEGIGMVLPLESEAKDKDKFGKVLALCMTFISILYGAFGALGYFAFGEETKDIITTNFGQGLLSTVVQIGLCVNLFFTFPLMMNPVYEVVERRLCDSRYSLWLRWLVVLLVSLVALTVPNFADFLSLVGSSVCVILSFVFPSVFHYMVFKDELNWNGVLVDWVIAFVGIVIAVSGTGSSLLEILAPKA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00563 423 Pfam Transmembrane amino acid transporter protein 32 412 IPR013057 -
Pte12g00563 423 PANTHER AMINO ACID TRANSPORTER 32 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00563 Pte-Chr12 5029724 5032024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00563 1 424 Organic Solute Cotransporters AT4G38250 65.446 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00563 K14209 - qsa:O6P43_024964 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00563 12 5029724 5032024 Pte12g00563 12 5029724 5032024 RCT