Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00560 ATGACGAGCATAAGGCCGTTGTCTGATGCGGTCCGTAGTTCGGTACGGTCTGGCATTTTCTTGTTCGACTTGACCAGGGTTGTTGAGGAACTCGTCTTCAACAGTTTGGATGCTGGAGCGAAAAAGGTAGAAGTCTTTGTTGATATTGGGAGATGCTTCGTAAAAGTATTTGATGATGGAACTGGTATTCCTCGAGATGGACTCGAAATGGTTGGACAGAGATATGCCACGTCAAAGCTCTTCAGCTTAGCTGATATGGAAGCAACGAGTGGGAGGTTTGGCTTTAGAGGGGAAGCATTAGCTTCCATATCTGATGTCTCTTTGCTAGAAATTTTAACAAGAACTCATGGGAAGCCTAATGGGTACCGAAAAGTGTTGAAGGGTTGCAAGTGTTTGTATCTTGGGATAGACGATGACAGGAAAGATGCTGGTACAACAGTCATTGTCCGTGATTTGTTTTACAATCAACCGGTTCGGAGGAAGTGTATCCAATCAAGCTCAAAGAAGGTTCTGCGATCTGTCAAGAAATGTGTACTGAGGCTTGCCTTTGTGCATCCAACGGTTTCTTTCAGAGTCGTTGATATTGAAAGTGAGGATGAACTTCTTTGGACACATCCTTCATCTTCTCCTCTGTCGCTATTAACCAACAGCTTCGGTGTGGAAATCTCAAACTCTCTCAAAAAATTGGAAGTTCATGATGGTGAACTAAAGATTTCTGGGTACATGTCAATTCTCTGTGATATGTTCATCTTTAAGGGCTTTCAGTATGTCTATATCAACTCTCAATTCATTTGCAAAGGTCCAATCCACAAGCTTCTGAATCAATTGGCTGATAGGTTTGAGCATGTAACTCATAGGAATGCTGATAACAGTTTGCCAAGCAAGAAGAGAAGTCGGCCAACATATCCAGCTTATTTGTTGAATTTAAGCTGTCCTCGCTCGCTCTATGATTTAACCTTTGAACCCTCTAAGACCTCCGTTGAATTTAAGTCCTTTCCAGCAGAGCATTTTACATGTGAGTAA 1023 0.4223 MTSIRPLSDAVRSSVRSGIFLFDLTRVVEELVFNSLDAGAKKVEVFVDIGRCFVKVFDDGTGIPRDGLEMVGQRYATSKLFSLADMEATSGRFGFRGEALASISDVSLLEILTRTHGKPNGYRKVLKGCKCLYLGIDDDRKDAGTTVIVRDLFYNQPVRRKCIQSSSKKVLRSVKKCVLRLAFVHPTVSFRVVDIESEDELLWTHPSSSPLSLLTNSFGVEISNSLKKLEVHDGELKISGYMSILCDMFIFKGFQYVYINSQFICKGPIHKLLNQLADRFEHVTHRNADNSLPSKKRSRPTYPAYLLNLSCPRSLYDLTFEPSKTSVEFKSFPAEHFTCE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00560 340 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 201 IPR036890 -
Pte12g00560 340 SUPERFAMILY Ribosomal protein S5 domain 2-like 198 331 IPR020568 -
Pte12g00560 340 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Pte12g00560 340 Gene3D - 213 334 IPR014721 -
Pte12g00560 340 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 - -
Pte12g00560 340 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 330 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Pte12g00560 340 NCBIfam DNA mismatch repair endonuclease MutL 4 331 IPR002099 GO:0005524|GO:0006298|GO:0030983
Pte12g00560 340 FunFam DNA mismatch repair endonuclease MutL 1 214 - -
Pte12g00560 340 Gene3D - 2 205 IPR036890 -
Pte12g00560 340 SMART DNA_mis_repair_2 214 338 IPR013507 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00560 K08739 - qsa:O6P43_024961 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00560 12 5014228 5017412 Pte12g00560 12 5014228 5017412 RCT