Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00557 ATGGTCCCATGTTACCAGGGTGGTTCTGATGGGTTAGCAGCTAACGACGTGGATCCACATTTGGTATTCCACCACGGGGTGCCACATGGAGGTACCAAGTTTGCTTACGACCGCACACAGAGGATACTTGCTCTTTCTACGAGGTATGGCCGTATAAAACTGTTTGGTAGAGATAATACACAAGCTTTGCTCGAGTCTAGCGAGGCAGTGCCTAGCAAGTTCTTAAAGGTACTTTCCTCGGTCCCTTTTTGGACTTTCTTGTGCGTTTGGGACACAGACAAGAAGCACTTGTCTAATGTGTATGTTTCAGATGAAGAAATTTCTTCTTTTACAGTTGTCGAGCACAGCCCATTCATGTATATGGGAGACCCTACCGGTAATATTTCAGTCTTGAAACTTCAACGCGAACCACTCCAGATAGTAAAAATGAAGTACACAATACCCCTCTCAGCATCTTCTGGGAATTCACCTGAAATTCCTGAAAGAGCTGCCGTGGTGCACATTCTGCCTCAACCAACTGCTGAATATAACAGGGTTCTCCTTGTTTACCAAAGTGGGCATATTACTTTATGGGACATACATGAAAGTAAATCTATCTTCAAAACCGGTTGCAGTACGTTGCAATCTCTTGGTCATGAAAGCAGAAAGGTTACTTCTACATGCTGGGCTTGTCCTTTTGGAAGTAAAGTAGTTGTAGGATACAGCAATGGGGAGATTTTCATCTGGAGCATCCCACCACCAAACAGTGCCACTGATTCTGCATTTGAGTCTAGCGCTCAAAATACTCCTTCATCCAAACTTAACTTAGGATACAAATCAGATAACATATCCATAGGGTCAATGAAATGGGTATATGCGGATGGGAAGGCAAGTCGATTATACGTCATGGGAGCATCAGAAAATGTATCTTCAAACTTCTTGCAGATATTATTGTTAAATGAGCACACTGAATCACGAAACATAAAATTGGGACTTCCTCTACCCGAGTCTTGTATTGACATGGAGATCATTTCAACTTCCAACGATCAAAGCAAGCATAAAGAAGAATGTTTTCTTTTACTGGGAAAATCTGGGAAAATCTACATGTACGACGATGGTATGATTGAGAAATATCTCCTCCAATGCCAGTCTAAGTCCACGCCAACATTTCCAAAGGAGATGGTTGCGAAACTTCCATTTTCAGATTCAAGCATCACTGTATCTAAATTTATTACAAACAATGCCATTATGGTGACATCTGATGAGGAGTATGCAATGCTGGTGAAAAATTACCCGTCTATTCTTCCCCCTGAAGTAAAGCAAAAAGATGGAACTAACTTGCTGGGAAGCTTCCCTGGATTCTCCATGGTTAAAAACTTGTATCTAACGGGGCACAGCAATGGAGCTATCACTATTTGGGATGCATCATCTCCTTTTTTTGTTCCTGTTTTACAAATTAAGCAACAGAGTGAAGATGATTTTTCTTTAAGCGGGATACCTGTGACAGCATTGTATTTTGACTGCAACTCTCCTCTTCTTGTTTCTGGAGATGAGAATGGAACGGTTCGTATAATTAAATTTAAACCCGAGCCATATACCACGGGAAATGGCTTCATGTCTCTTGCCGGAAGTACAAGAAAAGGCATGCACATAATCCACAGCATAAAAGTCGTCAAGATCAGTGGTTCAGTAAGTTTTATGGATATGGACCAGAGCTCGAGGAATTTTGCTGTTGGTTCTGAGCAAGGATATGTCTCACTCATTGATTTAGAAGGGCCAACTGTGCTATATCAGAAGCATATTGCAAGTGAAATTTGTGCTGGAATAGTATCTCTACAGTTCCACATTGGCAATCTGCATGGTTTTGAGAAGAAAATTGTTGCAGTTGCTACAAAGGACTCGTCTGTCTTTGCTCTTGATAGCGACACAGGGAATAACCTGGCAACTGGCAGTATCCATCCTAAGAAACCTTCTACAGCTCTATTTATGCAGATTTTAGATATTAAAGGAAATTCCAATGAGAATACACCACATAAGCAGTCGCTTCTACTCCTATGTTCTGAAAAAGCTGTATATGTGTATTCTTTAGCACATATTATGCAGGGAGTTAGAAAGGTTGTGTACAAGAAGAAGTATCAAACTTCATCTTGTTCCTGGGCGTCAACATTTTGCAGCTCAACCGACATTGGCCTAGCACTCCTTTTAACAAGTGGAAAAATGGAATTGAGGTAG 2211 0.4116 MVPCYQGGSDGLAANDVDPHLVFHHGVPHGGTKFAYDRTQRILALSTRYGRIKLFGRDNTQALLESSEAVPSKFLKVLSSVPFWTFLCVWDTDKKHLSNVYVSDEEISSFTVVEHSPFMYMGDPTGNISVLKLQREPLQIVKMKYTIPLSASSGNSPEIPERAAVVHILPQPTAEYNRVLLVYQSGHITLWDIHESKSIFKTGCSTLQSLGHESRKVTSTCWACPFGSKVVVGYSNGEIFIWSIPPPNSATDSAFESSAQNTPSSKLNLGYKSDNISIGSMKWVYADGKASRLYVMGASENVSSNFLQILLLNEHTESRNIKLGLPLPESCIDMEIISTSNDQSKHKEECFLLLGKSGKIYMYDDGMIEKYLLQCQSKSTPTFPKEMVAKLPFSDSSITVSKFITNNAIMVTSDEEYAMLVKNYPSILPPEVKQKDGTNLLGSFPGFSMVKNLYLTGHSNGAITIWDASSPFFVPVLQIKQQSEDDFSLSGIPVTALYFDCNSPLLVSGDENGTVRIIKFKPEPYTTGNGFMSLAGSTRKGMHIIHSIKVVKISGSVSFMDMDQSSRNFAVGSEQGYVSLIDLEGPTVLYQKHIASEICAGIVSLQFHIGNLHGFEKKIVAVATKDSSVFALDSDTGNNLATGSIHPKKPSTALFMQILDIKGNSNENTPHKQSLLLLCSEKAVYVYSLAHIMQGVRKVVYKKKYQTSSCSWASTFCSSTDIGLALLLTSGKMELR* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00557 736 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 9 736 - -
Pte12g00557 736 SUPERFAMILY WD40 repeat-like 176 655 IPR036322 GO:0005515
Pte12g00557 736 SUPERFAMILY WD40 repeat-like 32 416 IPR036322 GO:0005515
Pte12g00557 736 SMART WD40_4 480 519 IPR001680 GO:0005515
Pte12g00557 736 SMART WD40_4 544 582 IPR001680 GO:0005515
Pte12g00557 736 SMART WD40_4 202 243 IPR001680 GO:0005515
Pte12g00557 736 Gene3D - 51 251 IPR015943 GO:0005515
Pte12g00557 736 Gene3D - 442 726 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00557 Pte-Chr12 4986275 4992565 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00557 - - qsa:O6P43_033513 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00557 12 4986275 4992565 Pte12g00557 12 4986275 4992565 RCT