Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00552 ATGATGGAGAAAGCAGAACCGTGTCAAAAGTTGTACACTAGAATGCGGCTTTGGGAATTTCCAGATCAGTATGTGGTTGAGCCGACTGATGGATCTCATGGTTCATCTCTGTCTGTTAGTAGAGCTGATGGATCGATGAAGCTTATAGATGAGATTCCAGAAGATAGTTCTCTTCGAGTACCTAAGATCTGGACTATTTTTGGTGTCGCAGGGATGATAAAGCTTGTGGCCGGATCATATCTTTTAGTCATCACCGAGAGTGAAAGTGTTGGATCTTACTTGGGGCATCCAATCTTCAGAGTCTCTTCCATGAAGATCTTTCCTTGCGACCATTCTCTGAATAGTACTCCTGCAGAACAGAAAAAAGTTGAGAGTGAGTTTTCTGCACTGCTCAGCGTTGCGGAGAAGACTCATGGTCTGTACTTCTCATATGAAACTAATCTAACACTGAGTGCGCAACGTCTTAATGATTTGGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGGCTGAGCCTAGGTTTCTATGGAACAATTATTTGTTGGAATCACTAATAGATTGCAAGCTTGACCCCTTCTTACTTCCGGTGATCCAAGGCAGCTTTCAAAACATCCAAGCAGCCATTGGAAAGGATATTATTGATATCACACTGATTGCCAGGAGATGCACAAGAAGAAATGGCACTCGGATGTGGAGAAGAGGAGCTGATTCTGATGGTTATGTAGCTAATTTTGTGGAGACTGAGCAAATTATGCAGATTTCTGGGTTTTCAGCTTCATTTGTTCAGGTTCGGGGGTCAATGCCATTTCTTTGGGAGCAAATTGTTGATTTGACATATAAACCAAAGTTTGAAATTATCAAACCGGAGGAGGCTCCTCGAGTTGCAGAGCGTCATGTTTTGGATTTAAGAAAAAAGTATGGGGCTGTCTTAGCTGTTGATCTCGTAAACAAGCATGGTGGTGAGGGAAGATTGTGTGAAAAATTCGGCGATGCAATGCAACCTCTAGCTAGTGATGATGTAAGATATCTGCACTTTGACTTCCATCACATCTGCGGGCACATTCATTTTGATCGTCTCTCCATCCTCTATGAACAAATTTCAGATTTCCTTGAGAAAAATGGGTACCTTTTGTTGAATGAGAAAGGTGAAAAAATGAAGGAGCAACTTGGGGTTGTCAGGACCAACTGTATTGATTGCCTGGATCGCACAAACGTCACTCAGAGCATGATTGGCAGAAAAATGTTGGAATACCAGCTTAGGAGGCTTGGGGTTTTTGGTGCTGAAGAGACCATTAGTTCTCATCCAAATCTAGATTACCACTATAAGATCTTGTGGGCTAATCACGGGGATGACATAAGTATCCAATATTCAGGCACGCCTGCTCTGAAAGGAGATTTTGTGAGATATGGACAGCGCACAACACACGGGATCTTCAATGATGGCTGCAATGCACTTCTTCGCTATTATTTGAATAATTTTTGTGATGGAACGAAACAGGATGCTATTGATCTACTGCAAGGACATTATATCGTCAATGTCAGCCGGGACATGACTGCCCCATCTCAAAAAGGAGGCCTTGAATCAATAGCTTCGTTTCCTGTGGCTTTGACTGTGGTTCTGACGGGATTCTTTTTCGCAACCATCTCACTGAGGCAAGTTAGATATGACCTGCGGCACTTATTCTTTTCGATATTATGGGCAAGCTTTAGCATGGGTATAGCAGCATTTGTGAGGACCAACGGTCGAGTATTCTGCAACAGGCCTCGCCTGCACAAGCCTCGGCGTTGA 1791 0.4322 MMEKAEPCQKLYTRMRLWEFPDQYVVEPTDGSHGSSLSVSRADGSMKLIDEIPEDSSLRVPKIWTIFGVAGMIKLVAGSYLLVITESESVGSYLGHPIFRVSSMKIFPCDHSLNSTPAEQKKVESEFSALLSVAEKTHGLYFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYLLESLIDCKLDPFLLPVIQGSFQNIQAAIGKDIIDITLIARRCTRRNGTRMWRRGADSDGYVANFVETEQIMQISGFSASFVQVRGSMPFLWEQIVDLTYKPKFEIIKPEEAPRVAERHVLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGDAMQPLASDDVRYLHFDFHHICGHIHFDRLSILYEQISDFLEKNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRKMLEYQLRRLGVFGAEETISSHPNLDYHYKILWANHGDDISIQYSGTPALKGDFVRYGQRTTHGIFNDGCNALLRYYLNNFCDGTKQDAIDLLQGHYIVNVSRDMTAPSQKGGLESIASFPVALTVVLTGFFFATISLRQVRYDLRHLFFSILWASFSMGIAAFVRTNGRVFCNRPRLHKPRR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00552 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Pte12g00552 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
Pte12g00552 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00552 Pte-Chr12 4948810 4957855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00552 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 75.839 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00552 K21797 - gmx:100796999 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00552 12 4948810 4957855 Pte12g00552 12 4948810 4957855 RCT