Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00484 ATGGCAGCTAAAATCGAGAAAGACGCGACTCCTCCGCATCTTGTCGACGTTGCCATTAGCGACGATGATAACGGTGTCGTTAGGATTGCAACAATGAACTCGTCTTCAGTTGATCATATAAAACAGCAGACGTCTGATGTGATATTGCCGCCATCTGCGGCTAATCTTCAAAGCCTTGAATGGCGCAGTTTCTGGAAAGCTGGGGACTATGGCGTTGCTTCTGCCACTAAGCGTCCTACTGTTCAAGGTCATTTGGAGCACGCTCGTGTTCATCCCAAGTTTCTTCATTCTAACGCTACTTCTCATAAGTGGGCATTTGGAGCAATCGCTGAACTGATCGATAACGCTGTGGATGAGATTCACAATGGTGCAACGTTTGTGAAGGTTGATAAGATTAATATCATGAAGGATAACTCTCCAGCATTAATGTTCCTCGATGATGGAGGTGGAATGAATCCTGACTCTATACGGAAATGCATGAGCTTGGGTTACTCTTCAAAGAGGTCGAAGTCAACAATTGGACAATATGGTAATGGTTTCAAGACTAGCACAATGAGGTTAGGTGCTGATGTCATTGTTTTCAGCCGTGCAAATCGATCTGGCTGTGCCACACAAAGTGTTGGTCTACTGTCTTATACCTTTCTGCGAAAAACTGGGCAAGATGATGTTATTGTTCCAATGATAGACTTTGACATCTCTGGCCACTGGACGGAACCAATTATTTACAGTTCACTGGATGATTGGTCTTCTAACTTGAAAACTATCCTCGAATGGTCTCCCTTTGAGTCAAAGGAGGATCTCGTACTTCAGTTTGAAGATATTGGGGCGCATGGAACAAAAATCATTATTTACAATTTGTGGCTGAACGATGAGGGAATATATGAGCTGAATTTTGATGATGATGAGGAGGATATCAGGTTGAGAGATGAAGCGAGTAGGGGAAGTTCAATAAAGTTGCATAAAAAAGTTGTTGAGTACCAATCTCATATCTCTTATTGCCTCCGTTATTCCTTACGGGCATATGCTTCAGTGTTGTACCGAAGAAAATTTACCAACTTCAACATCATATTGAGAGGAGTACTTGTTGATCAGTACAATATTGCAGATGAATTTATACATAAAAAAGTGATGTCTTATAGGCCCCAGATGGGAGAGACATCGAGGGAGGTTACTGTCGAGGCGACCATAGGATTTGTGAAGGAGGCTCCAAATATTAATGTCTGTGGATTCAATGTGTATCATAAGAACCGTCTTATCAGACCTTTCTGGAAAGTAACGGCAGATGGTTCTTCCAAAGGGAATGGAGTTGTCGGGGTGATTGAAGCAAATTTTATAGAACCAGCACATGACAAGCAGGATTTTGAGAGATCTTCATTGTACATACGTCTGGAAACCAAGCTCAGACAGATGATAATGGACTATTGGAAAGAGCACTGTCATTTAATGGGCTACCAACCTCCCAAATCCAAAGCACAGTACATTCAGAAGGAAGGTTATCTTCAAAACTCTTCTGGACTAGTGAATAAGACTGGAAATAACTTGCCTTCTAACCATCATGGTGTCGTTATTGTAGCTGAACATGCAGATGGTGTACTTGGAAAACCAATTGCTAGTCTTCCTGCAGTTACTAAGAATATTCAACACAGGTCTGTTGAACAAGAGAAATCCACAGAACTTCAAGGCTCCGTGTCAATCGATCAGCTATGTGAAGAGAATATACAGCTTTTCATGAGGTAA 1737 0.418 MAAKIEKDATPPHLVDVAISDDDNGVVRIATMNSSSVDHIKQQTSDVILPPSAANLQSLEWRSFWKAGDYGVASATKRPTVQGHLEHARVHPKFLHSNATSHKWAFGAIAELIDNAVDEIHNGATFVKVDKINIMKDNSPALMFLDDGGGMNPDSIRKCMSLGYSSKRSKSTIGQYGNGFKTSTMRLGADVIVFSRANRSGCATQSVGLLSYTFLRKTGQDDVIVPMIDFDISGHWTEPIIYSSLDDWSSNLKTILEWSPFESKEDLVLQFEDIGAHGTKIIIYNLWLNDEGIYELNFDDDEEDIRLRDEASRGSSIKLHKKVVEYQSHISYCLRYSLRAYASVLYRRKFTNFNIILRGVLVDQYNIADEFIHKKVMSYRPQMGETSREVTVEATIGFVKEAPNINVCGFNVYHKNRLIRPFWKVTADGSSKGNGVVGVIEANFIEPAHDKQDFERSSLYIRLETKLRQMIMDYWKEHCHLMGYQPPKSKAQYIQKEGYLQNSSGLVNKTGNNLPSNHHGVVIVAEHADGVLGKPIASLPAVTKNIQHRSVEQEKSTELQGSVSIDQLCEENIQLFMR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00484 578 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 107 202 - -
Pte12g00484 578 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 45 577 IPR045261 GO:0016887
Pte12g00484 578 Gene3D - 91 337 IPR036890 -
Pte12g00484 578 FunFam MORC family CW-type zinc finger protein 4 91 292 - -
Pte12g00484 578 Pfam Morc6 ribosomal protein S5 domain 2-like 336 475 IPR041006 -
Pte12g00484 578 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 105 295 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00484 Pte-Chr12 4361128 4368239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00484 - - qsa:O6P43_033659 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00484 12 4361128 4368239 Pte12g00484 12 4361128 4368239 RCT