Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00467 ATGGATATGGAGAAAGTGTTTCACATGAATGGAGGAATAGGCAAAACTAGCTTTGCTCAGAATTCTTCATTGCAGAGGAAGGCCTCTGATGCTGTGAAGCACATCATAATAGAAACAATCCAAGAGGTATACCTTAGCACAACCCCAAAAACTTTAGGCGTTGCTTGTTTGGCCTGTTCTTCTGGTTCTAACATCCTGTCAATCATCAAGGATATACTGGATGCCATTGAAAGCATAACCCTTAAAATCCTGCACTGCCCTGCTCCAGAGTTTTGTGTATACCTTAACGATCTCCCAACCAATGACTTCAACTCAATTTTCAAGATCCTGCCGGAGTTTCAAAAGATGCTTAACCAAGAAAGAAAAGGAGCGTGTCCTTCAATTTTCATGGGAGGTTATCCTGGTTCTTTCTATGGTAGACTCTTCCCAAACAATAGCTTGCATTTTGTCCATTCTTCCTACAGTTTGCATTGGCTTTCAAGGGTTCCTCCAGCTATATATGACGAGCAGGGCAAGCCTCTAGACAAAAGCTCCATCTACATGTCAAAATCCAGCCCTCCATTGATCTGCCAAGCTTACTGCAAGCAATTTCAAGAGGACTTCTCTCTCTTCCTTAGGTCAAGGTCTGAAGAGCTGGTTGTCGGGGGAAGAATGGTGCTTTTTTTTCTGTTTAGATTTGTAACTGATCATGCTGACAGAGGCAATTCTTTCTTCTGGGAACCTCTCTCCAGTTCCTTTGCCATTTTGGTCTCCAAGGGAGAAATTGAAAAGGAGAAGGTTGATTCTTACGATGTTCATTTCTATGCACCATCAATGGAAGAGATAGAAGCAGCAGTAAAGAAAGAAGGGTCGTTCGTATTAGAAAATCTAGAGGTGTTGGAGTTAGAGAAAGAACAAACGGGCAGTGAGAGCTATGGGACAAGGGTTGCTAAGACTGTCAGGTCAGTCCAAGAATCTATGGGAAGTTATCATTTTGGTCAAGAAATCCTTGATAGCTTATTTGATAACTATGCAAGACTGATGGATGAAAAAATAGCAAAGGAAGACACGAACCCCATTACCTTTACCATCGTTGTGAGGAGAATATGA 1089 0.4187 MDMEKVFHMNGGIGKTSFAQNSSLQRKASDAVKHIIIETIQEVYLSTTPKTLGVACLACSSGSNILSIIKDILDAIESITLKILHCPAPEFCVYLNDLPTNDFNSIFKILPEFQKMLNQERKGACPSIFMGGYPGSFYGRLFPNNSLHFVHSSYSLHWLSRVPPAIYDEQGKPLDKSSIYMSKSSPPLICQAYCKQFQEDFSLFLRSRSEELVVGGRMVLFFLFRFVTDHADRGNSFFWEPLSSSFAILVSKGEIEKEKVDSYDVHFYAPSMEEIEAAVKKEGSFVLENLEVLELEKEQTGSESYGTRVAKTVRSVQESMGSYHFGQEILDSLFDNYARLMDEKIAKEDTNPITFTIVVRRI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00467 362 Gene3D Vaccinia Virus protein VP39 21 349 IPR029063 -
Pte12g00467 362 Pfam SAM dependent carboxyl methyltransferase 38 361 IPR005299 GO:0008168
Pte12g00467 362 Gene3D - 6 348 IPR042086 -
Pte12g00467 362 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 345 IPR005299 GO:0008168
Pte12g00467 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00467 Pte-Chr12 3978497 3980107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00467 - - vra:106753405 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00467 12 3978497 3980107 Pte12g00467 12 3978497 3980107 RCT