Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00464 ATGAGGCATTTTCTTTGGACTGTTTTTCTGCTGAGCTTGATTTACGGGCAATATGTTGTTGAAGCTGGTGGGGATGGTTTCATTAGAACAAGAGGGGTTCATTTTCTGTTGAATGGTAGCCCTTTCTACGCAAATGGCTTCAATGCCTACTGGCTAATGTACATGGGTTCTGACCCTTCTCAGAGACAGAAAGTTTCATCTGCCTTCAGTGATGCCACTAGTCACGGCCTCACTGTTGCTAGAACTTGGGCATTCAGCGACGGTGGCTACAGAGCTTTACAGTACTCTCCCGGTTCCTACAATGAGGAAATGTTTAAGGGGTTGGATTTTGTTATATCTGAGGCCAGGAAGTATGGAATTAAGCTCATACTAAGCTTGGCTAACAATTATGAAAGCTTTGGAGGAAAGCAGCAATATGTGAACTGGGCTAGAAGTCAGGGCCAGTATCTCACATCAGATGATGATTTCTTCAGAAACGCTGTTGTTAAGGGTTACTACAAGAATCATATAAAGACTATTCTGAACAGACTTAACACCTTTACTGGTATTCATTACAAAGATGACCCAACAATAATGGCTTGGGAACTGATGAATGAACCCAGATGCACTTCAGATCCTTCAGGAAGCACCATTCAGGTTTGTATAGTACTTCAAAACAAACGACCCAAACTTCGCTTTTCTTGTATTTTCCTTTTAAGTTCATTGCTTTCCTCGTTTGCAAGAATTCCAACACTAAAAAGCTTTCAACCTTTTTCTTGGATTTTAGGACAAAAAGTTAAATATATTTTCTTTCCTTTTTTCACTTCAACAACCAATTGGCTTCATTGTCGGTACTTGTATGATAGGCCTGGATAA 855 0.4023 MRHFLWTVFLLSLIYGQYVVEAGGDGFIRTRGVHFLLNGSPFYANGFNAYWLMYMGSDPSQRQKVSSAFSDATSHGLTVARTWAFSDGGYRALQYSPGSYNEEMFKGLDFVISEARKYGIKLILSLANNYESFGGKQQYVNWARSQGQYLTSDDDFFRNAVVKGYYKNHIKTILNRLNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGSTIQVCIVLQNKRPKLRFSCIFLLSSLLSSFARIPTLKSFQPFSWILGQKVKYIFFPFFTSTTNWLHCRYLYDRPG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00464 284 Gene3D Glycosidases 24 217 - -
Pte12g00464 284 Pfam Cellulase (glycosyl hydrolase family 5) 38 206 IPR001547 GO:0004553|GO:0071704
Pte12g00464 284 PANTHER - 5 212 IPR045053 GO:0004553
Pte12g00464 284 SUPERFAMILY (Trans)glycosidases 27 209 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00464 Pte-Chr12 3962203 3965101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00464 26 216 Glycoside Hydrolase AT5G66460 74.346 1.04e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00464 K19355 - qsu:112016006 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00464 12 3962203 3965101 Pte12g00464 12 3962203 3965101 RCT