Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00443 ATGGCCTTGCTAGACGAGTATGAGTCCGAGGAGCTTGATTATGGTTCCGACCCTAACCATCGTAGCGGATATGTGGCTGTACTTGGCAAGCCAAACGTAGGAAAAAGCACTCTTGCAAACCAAATGATTGGACAGAAGTTGTCAATAGTTACTGATAAGCGTCAGACTACCAGGCACCGAGTTCTTGGTATATGCTCTGCCCCAGATTATCAGATGATACTATATGACACTCCTGGTATTATGGAGAAGAAAATCCGCAAATTGAACACCATGATGATGAAGAATGTCTGCAGTGCTGGACTTAATGCAAATTGTATATTAGTTATTGTCGATGCATGTAAAGAGCCAGAAAAAATTGATGAGTTGTTGCTTGAAGGTGTCGGAGATCTTAAAGATAAGCTGCCTATTTTACTGGTCCTGAGCAAAAAAGATCTTATTAAACCTGGAGAAATTGCAAAGAAAGTTCAGTGGTTTCAGAAGTCTACTAATGCTGATGATGTGATACCTGTCAGTGCCAAATATGGTCATGGGGTAGAGGATGTCAAGGATTGGATACTGTCAAAACTGCCCTTAGGACCAGCTTATTATCCCAAGGACATTGTTAGTGAGCACCCTGAACGATTCTTTATTGCTGAAATTGTAAGAGAAAAGATCTTTCTGCAATTCCGTAAGGAAGTTCCTTATGCATGTCAGGTGAATGTTGTAAGTTACAAAACTAGGCCAAATGCTAAGGACTTCATACAAGTAGAAATTCTTGTTGAGAAAAACTCTCAGAAGATTATCATCATTGGGAAAGATGGGAAGGCTCTAAAGATGCTAGCAACAGCTGCCCGGCTTTATATCGAAGATTTCTTGCAGAAGAAAGTTTATCTTGAGGTTCCATTTTTATTGACGCCGGGCATTAGATTGTTAAAATGTTTACTTGCTATCAATGTATATATAAGGGAGCCTATTATGATAGTTGTTTGGGTAGATAATCATCCAGCTGATGTTTAA 996 0.3956 MALLDEYESEELDYGSDPNHRSGYVAVLGKPNVGKSTLANQMIGQKLSIVTDKRQTTRHRVLGICSAPDYQMILYDTPGIMEKKIRKLNTMMMKNVCSAGLNANCILVIVDACKEPEKIDELLLEGVGDLKDKLPILLVLSKKDLIKPGEIAKKVQWFQKSTNADDVIPVSAKYGHGVEDVKDWILSKLPLGPAYYPKDIVSEHPERFFIAEIVREKIFLQFRKEVPYACQVNVVSYKTRPNAKDFIQVEILVEKNSQKIIIIGKDGKALKMLATAARLYIEDFLQKKVYLEVPFLLTPGIRLLKCLLAINVYIREPIMIVVWVDNHPADV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00443 331 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 21 191 IPR030388 GO:0005525
Pte12g00443 331 Pfam KH domain 225 293 IPR004044 GO:0003723
Pte12g00443 331 Gene3D - 203 303 IPR015946 -
Pte12g00443 331 Pfam 50S ribosome-binding GTPase 25 142 IPR006073 GO:0005525
Pte12g00443 331 CDD KH-II_Era 211 293 - -
Pte12g00443 331 Gene3D - 18 202 IPR027417 -
Pte12g00443 331 PANTHER GTPASE ERA 6 293 IPR005662 GO:0003723|GO:0005525
Pte12g00443 331 FunFam GTPase Era 18 201 - -
Pte12g00443 331 NCBIfam GTPase Era 23 293 IPR005662 GO:0003723|GO:0005525
Pte12g00443 331 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 198 293 IPR009019 GO:0003723
Pte12g00443 331 CDD Era 20 189 IPR030388 GO:0005525
Pte12g00443 331 Hamap GTPase Era [era]. 20 313 IPR005662 GO:0003723|GO:0005525
Pte12g00443 331 NCBIfam small GTP-binding protein domain 25 184 IPR005225 GO:0005525
Pte12g00443 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00443 Pte-Chr12 3759004 3762937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00443 K03595 - cpap:110822383 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00443 12 3759004 3762937 Pte12g00443 12 3759004 3762937 RCT