Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00427 ATGGTGCACAGTGCTTACGATTCCTTCGAACTTGTCAGTGGTTGTCCAACAAAGATCGAATCAATCGAATCATACGGCTCAAAGCTTTTACTTGGATGCTCCGATGGTTCCCTTCGGATCTATGCTCCTGATTCATCCGAATCCGATCGGTCTCCACCGTCCGAATTCCACTCTCACACTTCCCCAGAGCTGCGCAAAGAGCCCTATGTTCTGGAGAAGAACATGTCTGGGTTTTCAAGGAGGCCTGTGGTGGCAATGGAGATTGTGGAATCCAGAGAGTTACTTCTGTCACTCTCTGAATCCATAGCGTTGCACAGGTTACCCAATTTTGAGACATTGGCTGTTATAACCAAAGCCAAAGGAGCCAATGTGTTTTCATGGGACGATCGAAGAGGGTTCTTGTGTTTTGCCAGACAAAAAAGAGTCTGCATATTTAGACAAGATGATGGTAGGGGATTCGTGGAGGTCAAAGAATTTGGTATTCCAGATGTGGTGAAGTCAATGTCTTGGTGTGGCGAAAATATCTGTTTGGGGATTAGAAGAGAGTATGTGATACTAAATGCTACAAATGGTGCATTGTCTGAAGTGTTCACTTCTGGAAGGCTAGCTCCTCCACTGGTGGTCTCTATGCCCACCGGAGAACTTCTTCTTGGCAGGGAGAATATTGGAGTTTTTGTTGATCAAAATGGGAAGCTTCTTCCTGAGGGAAGGATTTGTTGGACAGAGGCCCCGACAAAGGTTGTGATTCAGAAGCCTTATGCTATAGGTCAGCTGCCAAGATTTATTGAGGTTCGATCTCTTCGGGACCCATATCCACTGATTCAAACTGTTGTTCTTCGAAATGTTCGTCATATTCACCAAAGCAAGACTGCTGTAATAGTTGCAATGGAAACATCTGTCCATGGCCTCTTTCCCGTCCCAATTGGCGCCCAGATTGTACAATTAACAGCATCCGGAAACTTTGAGGAAGCATTATCCTTGTGTAAGCTGCTTCCTCCTGAGGAGTCCAGTCTTCGAGCTGCAAAGGAGAGTTCAATCCATATAAGATATGCTCATTATCTCTTTGATAATGAGAGCTACGAGGAGGCCATGGAACACTTCTTAGAATCCCAAGTGGAAATAACCTATGTGCTGTCGTTATATCGATGTATTGTTCTTCCTAAGACTACCTTGGTGGTTCATGATCCAGAGAAGTATGATAGCACATGGGATGTTCCAAATCTCTCCAGAGGATCATCTGGTATTTCAGATGATATGGAATCATCTCTGCCAGCTAACCTGTCAGAATGTGATGAAAGTACATCTTTAGAATCCAAGAAAATGAGTCATAACATGCTTATGGCTCTTGTTAAGTATTTGCAAAAGAAGAGATTTGGCATAATTGATAAGGCCACTGCTGAGGGAACTGAAGAAGTTGTTCTAGATGCTGTAGGCGATCACTTTTCATCATATAGTGCTTCTAGATTAAGAAAAATGCACAAGGGGCGTAGTAGCACTACTGTTAGTTCAGGTGCTCGAGAGATGGCTACAATACTGGATACAGCACTACTGCAAGCCCTAATTTTGACTGGTCAGTCATTCTTGGGCTTAGAACTATTGAGAGGTGTTAACTATTGTGATTTAAAAACTTGTGAGGAGATCCTGCGCAAAAGCAACAATAATCTTGCACTTTTGGAACTTTATAAGTGCAATTCCATGCACCGAGATGCCCTTGAACTTCTTCATAAATTGGTGGAAGAGTCGAAGTCAAACCCACAAGCAGATATTGGCCAGAGGTTTAAGCCTGAATGCATCATCGAATATCTCAAGCCTTTATGTGAAACTGATCCCATGCTCGTGCTGGAATTCTCAATGCTTGTTCTTGAAAGCTGTCCTTCGCAAACCATTCAGCTCTTTCTGTCAGGAAACATTCCAGCGGATCTGGTAAACTCATATTTGAAGCAGCATGCTCCTAGCATGCAAGCCACTTACCTGGAACTGATGCTTGCAATGAATGAGAATGGGATATCAGGAAATCTGCAAAATGAAATGGTGCAAATCTATCTTTCTGAGGTACTTGAGTGGTATGCAGATTTAACTGCTAAACAGAAATGGGATGAAAAAGCTCATTCACCAACCAGGAAAAAATTGTTATCCGCTTTGGATGGGATATCAGGATATAACCCAGAGACCTTCTTAAAACGCCTTCCACCAGATGGTTTATTTGAAGAACGTGCAATATTGCTGGGAAAAATGAATCAACATGAACTTGCTTTATCTCTCTATGTTCACAAGCTTCATCTTCCTGAGTTGGCGTTGTCATATTGTGATCGGGTGTATGAATCTGTTGTTAACCAGCCATCTGCAAAATTTACCGGAAATATATACCTAACCCTTCTCCAAATATATCTAAATCCACGGAGGACAACGAAAAACTTTGAAAAGAGAATTACGAATATACTGTCACCTCAGAGTACTAGTACTCCAAAAGGTGGCTCTCTGACAACAGTCAAAAACAAAGGCAGCCGTGGAAATAAGAAAATTGCTGAAATAGAAGGTGCAGAGGACATGCGAGTTGGTCTGAGTAGTACTGACAGTGGCAAGAGTGATGGTGATGCTGATGATCCCAATGAGGAGGGAGGTAGCACTATCATGCTCGATAAGGTTCTTGATGTGCTGAGCCACAGATGGGAAAGAATAAATGGAGCCCAGGCCCTACGGCTTTTGCCAAGAGAAACTAAACTTCAGAACTTGCTTCCTTTTCTTGGACCACTTCTGCGGAAATCTAGTGAAACACACAGGAATTATTCTGTGATCAAGAGTTTGAGGCGGAGTGAGAACCTTCAGGTCAAAGATGAACTTTACGACCAGAGGAAAGCAGTAGTCAAGATAACCAGTGACAGCATGTGTTCTCTTTGCAACAAGAAAATAGGGACAAGCGTTTTTGCAGTCTACCCCAATGGCAAAACTATTGTACACTTTGTCTGCTTCAGAGACTCTCAGAGCATGAAAGCTGTGACCAAAGGCTCAGCACAAAGGAAGCGATAG 3027 0.4295 MVHSAYDSFELVSGCPTKIESIESYGSKLLLGCSDGSLRIYAPDSSESDRSPPSEFHSHTSPELRKEPYVLEKNMSGFSRRPVVAMEIVESRELLLSLSESIALHRLPNFETLAVITKAKGANVFSWDDRRGFLCFARQKRVCIFRQDDGRGFVEVKEFGIPDVVKSMSWCGENICLGIRREYVILNATNGALSEVFTSGRLAPPLVVSMPTGELLLGRENIGVFVDQNGKLLPEGRICWTEAPTKVVIQKPYAIGQLPRFIEVRSLRDPYPLIQTVVLRNVRHIHQSKTAVIVAMETSVHGLFPVPIGAQIVQLTASGNFEEALSLCKLLPPEESSLRAAKESSIHIRYAHYLFDNESYEEAMEHFLESQVEITYVLSLYRCIVLPKTTLVVHDPEKYDSTWDVPNLSRGSSGISDDMESSLPANLSECDESTSLESKKMSHNMLMALVKYLQKKRFGIIDKATAEGTEEVVLDAVGDHFSSYSASRLRKMHKGRSSTTVSSGAREMATILDTALLQALILTGQSFLGLELLRGVNYCDLKTCEEILRKSNNNLALLELYKCNSMHRDALELLHKLVEESKSNPQADIGQRFKPECIIEYLKPLCETDPMLVLEFSMLVLESCPSQTIQLFLSGNIPADLVNSYLKQHAPSMQATYLELMLAMNENGISGNLQNEMVQIYLSEVLEWYADLTAKQKWDEKAHSPTRKKLLSALDGISGYNPETFLKRLPPDGLFEERAILLGKMNQHELALSLYVHKLHLPELALSYCDRVYESVVNQPSAKFTGNIYLTLLQIYLNPRRTTKNFEKRITNILSPQSTSTPKGGSLTTVKNKGSRGNKKIAEIEGAEDMRVGLSSTDSGKSDGDADDPNEEGGSTIMLDKVLDVLSHRWERINGAQALRLLPRETKLQNLLPFLGPLLRKSSETHRNYSVIKSLRRSENLQVKDELYDQRKAVVKITSDSMCSLCNKKIGTSVFAVYPNGKTIVHFVCFRDSQSMKAVTKGSAQRKR* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00427 1008 MobiDBLite consensus disorder prediction 811 875 - -
Pte12g00427 1008 Pfam CNH domain 27 286 IPR001180 -
Pte12g00427 1008 PANTHER CNH DOMAIN CONTAINING 1 996 IPR032914 GO:0016192
Pte12g00427 1008 ProSiteProfiles Citron homology (CNH) domain profile. 16 292 IPR001180 -
Pte12g00427 1008 MobiDBLite consensus disorder prediction 811 835 - -
Pte12g00427 1008 Pfam Region in Clathrin and VPS 641 772 IPR000547 GO:0006886|GO:0016192
Pte12g00427 1008 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 629 798 IPR000547 GO:0006886|GO:0016192
Pte12g00427 1008 SUPERFAMILY WD40 repeat-like 25 182 IPR036322 GO:0005515
Pte12g00427 1008 Pfam Vacuolar sorting protein 39 domain 2 883 991 IPR019453 -
Pte12g00427 1008 Pfam Vacuolar sorting protein 39 domain 1 512 621 IPR019452 -
Pte12g00427 1008 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00427 Pte-Chr12 3571020 3577388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00427 K20183 - cave:132186416 1575.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00427 12 3571020 3577388 Pte12g00427 12 3571020 3577388 RCT