Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00425 ATGAACAACAAACCAAGTCAAGTTTGTGATGCTAGAGAAGGAGAAGAGGAAGCGGATATTCATGATTGTAAGGATGATGCAATCAGTGCTGGTTTTGTTCCTGGCCCTCTTCTTCCAAAAAGGGGTCATGCCACCGTGTTCAATTCTAGTTCGTGGTTGCCAATTGCCATGTTCCTTCGCGGAAAACACTCCCAAAACCTGGTGAGTGATTCTTCACAACGAGATGCAAAGCCTGAAGTTGCACATGAAGGTGAGACTGGAAAAGTGTCTAGAGCCAACTTTCACGATCGACGGGGTAGGACTGTGCTTATAATGAGGCCTGGAATGCAGGCTGTCAAATATTTCCTGGATCCGAAGACAGCAGAAAAAGTGAAGCTTGTTTATCCGAATGATAAGGACAGTGTGGAACTCACGAAATCATTCTTTGATGTTGATAATCTTCCTAGTGAGTTTGGGGGAAAAGCTACCCTGAAGTATGACCATGAGGAGTTCTCTCGGTTGATGGCAGAAGATGATGTGAGAACTGCCAAGTTTTGGGGACTAGAAGATAAGCCGTTCCCCATTCTGGTGCAGAGATGGTGCCTGAACCAATTTCAGTTGCACCACTAG 609 0.4548 MNNKPSQVCDAREGEEEADIHDCKDDAISAGFVPGPLLPKRGHATVFNSSSWLPIAMFLRGKHSQNLVSDSSQRDAKPEVAHEGETGKVSRANFHDRRGRTVLIMRPGMQAVKYFLDPKTAEKVKLVYPNDKDSVELTKSFFDVDNLPSEFGGKATLKYDHEEFSRLMAEDDVRTAKFWGLEDKPFPILVQRWCLNQFQLHH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00425 202 SUPERFAMILY CRAL/TRIO domain 110 168 IPR036865 -
Pte12g00425 202 Gene3D - 109 177 IPR036865 -
Pte12g00425 202 MobiDBLite consensus disorder prediction 75 90 - -
Pte12g00425 202 PANTHER GH16843P 109 184 - -
Pte12g00425 202 MobiDBLite consensus disorder prediction 68 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00425 Pte-Chr12 3561670 3565076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00425 K26544 - tcc:18610938 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00425 12 3561670 3565076 Pte12g00425 12 3561670 3565076 RCT
Pte14g00916 14 30844726 30848394 Pte12g00425 12 3561670 3565076 RCT