Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00407 ATGGGGAAAGGTGGAGGTTGCGTTCCAAGCAAGAAGAAGGTGCCTTCAGCTGTCGTTGCCCAGAGAGACACTGGAGCTGCTGGCTTTGGCGGAGGATTGAGGGAGGCGCCGATCCCTGTCGAGGATAGCACCCCAGATGCCGATGTAAGTACTTACAGGGCAATCGCAGATTCTGGGGGGCAGCCGTCAGAGAAATTGAAGATTTTCATCGTGTTCTATTCGATGTACGGACACGTTGAAGGTTTGGCCAGGAGGATGAAGAAGGGAGTGGATGGTGTTGATGGGGTTGAAGGGGTGTTGTATAGGGTAACGGAGACACTACCTGCTGATGTATTGGAACAGATGAAGGCACCTCCAAAGGATGACTCTATACCGGAGATAACGGCCGCAGAATTGGTACGGGCGGATGGATTGTTGTTTGGTTTTCCCACGAGGTATGGGTGCATGACTGCACAAATGAAGGCTTTCTTTGATTCAACTGGACAGTTATGGAAGGAACAGAAGCTTGCAGGCAAGCCTGCTGGATTCTTTGTCAGTACAGGGACACAAGGAGGCGGTCAAGAAACTACTGCCTGGACAGCTATCACCCAATTAGCACACCATGGTATGCTGTTTGTTCCCGTAGGTTATACCTTCGGAGCTGGTATGTTCAAGATGGACTCCATCCGTGGGGGTACTCCCTATGGTGCAGGAGTCTTTGCTGGTGATGGCACAAGAGAACCCAGTGAAACAGAGCTGGCACTAGCAGAGCACCAGGGTAAATATATGGCTGCTGTAGTCAAAAGGCTAGCCTAG 795 0.5119 MGKGGGCVPSKKKVPSAVVAQRDTGAAGFGGGLREAPIPVEDSTPDADVSTYRAIADSGGQPSEKLKIFIVFYSMYGHVEGLARRMKKGVDGVDGVEGVLYRVTETLPADVLEQMKAPPKDDSIPEITAAELVRADGLLFGFPTRYGCMTAQMKAFFDSTGQLWKEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPVGYTFGAGMFKMDSIRGGTPYGAGVFAGDGTREPSETELALAEHQGKYMAAVVKRLA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00407 264 SUPERFAMILY Flavoproteins 67 263 IPR029039 -
Pte12g00407 264 Gene3D - 65 264 IPR029039 -
Pte12g00407 264 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 67 263 - -
Pte12g00407 264 ProSiteProfiles Flavodoxin-like domain profile. 68 256 IPR008254 GO:0010181
Pte12g00407 264 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 65 264 - -
Pte12g00407 264 Pfam NADPH-dependent FMN reductase 82 209 IPR005025 GO:0016491
Pte12g00407 264 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 67 263 IPR010089 GO:0003955|GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00407 Pte-Chr12 3380227 3382852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00407 K03809 - jre:118343957 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00921 14 30936147 30939587 Pte12g00407 12 3380227 3382852 RCT
Pte12g00407 12 3380227 3382852 Pte12g00407 12 3380227 3382852 RCT