Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00380 ATGCCGACTGTGGGAAAGAGGAGACGAAATGTTCAGTCCCCACGGAAAACTAGCCCAACGGAGAACCTGAGCTATGATAACCAAAACGAATCGCAGAAAATATCTCAGTACGAGGAATCCAGGGAAAAAAGAATCCGAGAAAACCTTGAGAGAATGGAAAAGCTTGGCATAATCGATCTTTCTCTCAAGCTCAAGTCTAGTATGGTTCAAAGGCATGCCTCAAGGAATCGATGGGATCGTAAAACCCCTCAGCATCCATTGCCTGTGTCTGTGCCAGCCGGGCCTGTTAGGCGCTCTAGCAGACTGCAGAATGCGACGCCGGTTAGCTACTCGGAGTTGAAAGAACCATCTATTGGTAACGAGGGTCTTGTATTGGAGGCCGGTTCCAAACCAGAGGTTTATACTGAAGAGCATGAGAAGCTGCTAGGACATACTGAGAGGAGCTGGGCATTTTTTGTCGATGGATATGCAAAGGATGGGAAGCGAATTTACGATCCGGTCAAGGGAAAAACTTGCCATCAGTGCAGGCAGAAAACTCTGGGTTATCGTACACAATGCAGGAAATGCGGCCTAGTCCAGGGTCAGTTCTGTGGAGACTGTTTGTATATGAGATATGGGGAGCATGTGCTCGAAGCTTTACAAAATCCAAATTGGATATGCCCCGTCTGTCGTGGAATTTGCAACTGCAGCTTGTGTAGGCAATCAAAAGGGTGGGCCCCCACTGGTGTTATCTATAGAAAGATATCACAAATGGGGTACAAATCAGTTGCACATTATCTAATACAAACTAAGCGGTCTGATGCGATGGCAGCTAAACCTGTAGATCCTACTGAACAACTTTCAGTAAAAAGATCACTTCCCTTCTCGGATAGGATTGCAATGTCGGAGGGGTCTCTTCTGGTCAATGAGGAGCACATGACACCTGAAGGTGTTGGAGACCATGGTGAAACGTGCATTAGTGATGATCAGGGCTCTGTCGGTCAAGTTTCTGTAAGGAGATCACTGCCTTTTTATAATACCAAAGCCGTGGCGGAGAAACAGGAAATGGTAGATGACGCCAAGGGAGGAGTCCTTGATAAAATTGATGGCCAATTTGATGGTGATACGGCACCAAAAAGGGTCTCAGATCTCAAACTGGAGACTGTTTCTGTGAACAATGACAGCCATATCCGCACTGGTGAAAATGTGACTCAAACTCTTGAGAGGGACATGAAACGTGAGAGTGATTTTCCGGGGCAAAAAGCGGAAATGGGGGATATCAAGGAAGAGTATACTGAAGAGAGCAAACAGTGTAACGACCTTTTAGCATTGAAGACTAACTCAATACTCAAGGACTCTGCTCAGAGTGTGGAAAGAACCCTAGACAGTATTGCTGGAAGACTAAAGCACAGACGCAAATCAGAAGCGGGCTGCGAACGGTTTAGTTTGAATCATAAAACCTCTGTTTCTGACTGCAAGCATGAGATTGACATTTCAGGAAATAAGAAGACTCAAGCTTCACTTGCTGATGTGGCAACTGGTTCTGCCAAACGTAGCTCTGATTGTATAGGTAGAAGACTAAGGCCTAGGTGCGAGAGAACATGA 1584 0.4596 MPTVGKRRRNVQSPRKTSPTENLSYDNQNESQKISQYEESREKRIRENLERMEKLGIIDLSLKLKSSMVQRHASRNRWDRKTPQHPLPVSVPAGPVRRSSRLQNATPVSYSELKEPSIGNEGLVLEAGSKPEVYTEEHEKLLGHTERSWAFFVDGYAKDGKRIYDPVKGKTCHQCRQKTLGYRTQCRKCGLVQGQFCGDCLYMRYGEHVLEALQNPNWICPVCRGICNCSLCRQSKGWAPTGVIYRKISQMGYKSVAHYLIQTKRSDAMAAKPVDPTEQLSVKRSLPFSDRIAMSEGSLLVNEEHMTPEGVGDHGETCISDDQGSVGQVSVRRSLPFYNTKAVAEKQEMVDDAKGGVLDKIDGQFDGDTAPKRVSDLKLETVSVNNDSHIRTGENVTQTLERDMKRESDFPGQKAEMGDIKEEYTEESKQCNDLLALKTNSILKDSAQSVERTLDSIAGRLKHRRKSEAGCERFSLNHKTSVSDCKHEIDISGNKKTQASLADVATGSAKRSSDCIGRRLRPRCERT* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00380 527 MobiDBLite consensus disorder prediction 97 113 - -
Pte12g00380 527 MobiDBLite consensus disorder prediction 71 113 - -
Pte12g00380 527 MobiDBLite consensus disorder prediction 15 34 - -
Pte12g00380 527 CDD FYVE_like_SF 171 223 - -
Pte12g00380 527 PANTHER OS05G0300700 PROTEIN 27 453 IPR040221 GO:0006355
Pte12g00380 527 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 164 260 IPR018866 -
Pte12g00380 527 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00380 Pte-Chr12 3151370 3154705 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00380 K23408 - cave:132187663 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00380 12 3151370 3154705 Pte12g00380 12 3151370 3154705 RCT