Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00367 ATGGTGAGATGGTGGCGCTTCACCTCCGGTCATCTGCAAAAGGTTGTGGGGAACCGAGTCGTCCCGCCATCCTTATCACAGTATTCTGGGTACCACACGATCCAAGCTATCCCCAGAGAGTGCACTGGTAGCAGGATATCGGCAAAGGACCGAGACCAAGGTCGGATACCCGCCGTTGTATTCTCTCAAAACCTCTTAGACAAAGAACCGAGCAATCGAATGGCTTCGAGGAAGCATTTGCTTACAACCGAGAGAAAGCAGATCAAGTCCATATTAGACTCGGTTCAGCTCCCGTTCTTCTGCTCGACCCGTTTCCCCCTGCAGATCCGTGCTGGTTCCGGGTCATCCCATTTGGTCGAATCCGGAATCGTCCTGCCGATCAAGATACATAGGCAGGAAGAGACTGGGAAGATATTGAATTTAGTGTTTGTATGGGCGGATGATGGGGCAGAGTTGAAGGTTGATGTCCCTGTAGTTTTCAAAGGAGAAGATGCTTGTCCTGGTCTAAAGAAAGGGGGTTGTTTGAACAGGATTAGAACTACTTTAAAGTATCTCTGCCCAGCTGAGCATATTCCTTCAAAAATTGAGGTGGATATAAGCAATCTAGATATCGGGGACAGAATTTTCATGCATGAAGTTCAGGTTCACCCATGCTTGAAGCTTCTGAGTAAGAACGAAACAATGCCTGTCTGTAAGATAGTTTCAACCACTGCAGATTACCACGAGTCTGCTAGTCAGTGA 741 0.4777 MVRWWRFTSGHLQKVVGNRVVPPSLSQYSGYHTIQAIPRECTGSRISAKDRDQGRIPAVVFSQNLLDKEPSNRMASRKHLLTTERKQIKSILDSVQLPFFCSTRFPLQIRAGSGSSHLVESGIVLPIKIHRQEETGKILNLVFVWADDGAELKVDVPVVFKGEDACPGLKKGGCLNRIRTTLKYLCPAEHIPSKIEVDISNLDIGDRIFMHEVQVHPCLKLLSKNETMPVCKIVSTTADYHESASQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00367 246 SUPERFAMILY Ribosomal protein L25-like 38 234 IPR011035 GO:0006412
Pte12g00367 246 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Pte12g00367 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 27 238 - -
Pte12g00367 246 Pfam Ribosomal protein TL5, C-terminal domain 152 235 IPR020057 -
Pte12g00367 246 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 149 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00367 Pte-Chr12 3046778 3049102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00367 K02897 - qsa:O6P43_033797 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00367 12 3046778 3049102 Pte12g00367 12 3046778 3049102 RCT