Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00329 ATGGAAATTGCATCGAGTAGACTTAGTCTCGGCGGCGGCGACGATCGTTCTCCGATTTCAGTCGTATCCCGATGGAGTTACGACGTGTCTAGGCAGTACCAGCATCTGCTCGATAAGACGACCCCTCACCTTCTCAACCGTTGGATCGGAACCTTGCTTATAGCAATGATCTACCTCGTACGCGTCTACTTTGTCGAGGGATTCTACATCGTCTCTTATGGTTTGGGCATCTACATCCTGAACCTACTCATCGGCTTTCTCTCTCCTCAGGTTGACCCTGAAATTCAGGACTTGTCTGAGGGACCGTCCCTTCCGACCAGAGGATCGGATGAGTTCCGACCCTTCGTTCGCCGCCTTCCGGAGTTCAAGTTCTGGTACCTCCCTCATCACCCATTACTCTCCGTCATCGTTTTCTTTTAA 420 0.5119 MEIASSRLSLGGGDDRSPISVVSRWSYDVSRQYQHLLDKTTPHLLNRWIGTLLIAMIYLVRVYFVEGFYIVSYGLGIYILNLLIGFLSPQVDPEIQDLSEGPSLPTRGSDEFRPFVRRLPEFKFWYLPHHPLLSVIVFF* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00329 139 Pfam Rer1 family 26 128 IPR004932 GO:0016020
Pte12g00329 139 PANTHER PROTEIN RER1 15 127 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00329 Pte-Chr12 2705739 2708737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00329 12 126 Miscellaneous Gene Families AT4G39220 66.957 1.90e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00329 - - jre:109009111 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00329 12 2705739 2708737 Pte12g00329 12 2705739 2708737 RCT
Pte14g00991 14 31527373 31529616 Pte12g00329 12 2705739 2708737 RCT