Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00263 ATGGCTGCTGCGACTGACACCGAGAAAGTTAAAGCAAAGCTGGGTGATCTGAACAAGGAGTCTTTTGTGCCACTGCTCTCAAAGCTCATTGGGGAATCAAAATTCGTCCAGAACAACCCGCCGGAGCTTATCCCACAGGAAGATAAAGTCATCAATCACCTTTTGAATGTTCTACTTCCGTTGAGCACCACCACTGGCGGTGGACCTTTAGTAATCAATCATGTCACCTATTATCCTGGTAGAGGTAACCTTATTGTGGAATACCCTGGTACTGTGCCTGGGAAGATTGTGTCTTTTGTCGGATCCCACATGGATGTCGTCACTGCCAATCCCAATGTTTGGGAATTTGATCCTTTTTCGCTGAGCATCGACGGGGATAAACTTCGTGGGCGTGGGACGACTGATTGTTTGGGACATGTTGCACTTCTAACTGAACTCATGAAGAAGCTCGGAGAGACCAAACCGGAACTGAAATCAACTGTTGTTGCGGTCTTCATAGCCAATGAAGAGAATTCTGCCATTACAGGTGTTGGTGTGGATGCCCTTGTAAAGGATGGACTCCTGAATAAGCTCAAGGACGGTCCTCTGTATTGGGTTGACACAGCAGATAAACAGCCTTGCTTAGGGACTGGTGGAGTGATACCCTGGCATCTTCAAGCTACAGGGAGGCTTTTTCACAGTGGTTTAGCACACAAGGCTATAAATGCTTTGGAGTTAGCCATGGATGCTCTAAAGGAGATCCAGTTGCGATTTTACAGAGATTTCCCACCTCATCCTCAAGAGCAGGTTTACAAATTCGCAACGCCTTCAACCATAAAACCAACTCAATGGAAATATCCTGGGGGTGGAATGAATCAAATTCCTGGCGAATGCACAATCTCAGGAGATGTCAGGTTAACTCCTTTTTACAATGTAAAGGAAGTGATGAAGAAGCTACAAGAATATGTTGATGATATTAATGAAAATATAGAGAAACTCGAATCAAGAGGTCCAGTTTCAAAATATGTATGTTCAGAAGAGAATATGAGAGGAAGCCTATCCATTAGTTTTGATGAGGCAAATGCTGGGGTTGCCTGTGATCTTAATTCTCGTGGTTACCATGTTTTATGCAAAGCAACCGAAGAAGTTGTTGGTCATGTGAAGCCTTATTCAATCACCGGCAGTTTGCCTCTAATTCGAGACCTAAAGGATGAAGGCTTTGATGTTCAGTGCATAGGTTATGGATTGACCTCAACCTACCATGCTGAGAATGAGTATTGTCTTTTCTCCGATATGAATCAGGGATACTGTGTGTTCACAAGCGTCATCTCTCAATTGGAAGATTAG 1326 0.4397 MAAATDTEKVKAKLGDLNKESFVPLLSKLIGESKFVQNNPPELIPQEDKVINHLLNVLLPLSTTTGGGPLVINHVTYYPGRGNLIVEYPGTVPGKIVSFVGSHMDVVTANPNVWEFDPFSLSIDGDKLRGRGTTDCLGHVALLTELMKKLGETKPELKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKDGPLYWVDTADKQPCLGTGGVIPWHLQATGRLFHSGLAHKAINALELAMDALKEIQLRFYRDFPPHPQEQVYKFATPSTIKPTQWKYPGGGMNQIPGECTISGDVRLTPFYNVKEVMKKLQEYVDDINENIEKLESRGPVSKYVCSEENMRGSLSISFDEANAGVACDLNSRGYHVLCKATEEVVGHVKPYSITGSLPLIRDLKDEGFDVQCIGYGLTSTYHAENEYCLFSDMNQGYCVFTSVISQLED* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00263 441 Pfam Peptidase family M20/M25/M40 100 437 IPR002933 GO:0016787
Pte12g00263 441 FunFam Acetylornithine deacetylase, putative 16 207 - -
Pte12g00263 441 PANTHER ACETYLORNITHINE DEACETYLASE 8 440 - -
Pte12g00263 441 SUPERFAMILY Zn-dependent exopeptidases 16 439 - -
Pte12g00263 441 Gene3D - 212 328 - -
Pte12g00263 441 Gene3D Zn peptidases 3 205 - -
Pte12g00263 441 CDD M20_ArgE-related 17 439 - -
Pte12g00263 441 Coils Coil 309 329 - -
Pte12g00263 441 Pfam Peptidase dimerisation domain 209 322 IPR011650 -
Pte12g00263 441 SUPERFAMILY Bacterial exopeptidase dimerisation domain 212 322 IPR036264 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00263 K01438 - gmx:100814676 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00263 12 2122161 2126151 Pte12g00263 12 2122161 2126151 RCT