Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00252 ATGGGTAGAGATGAAAGTGGAAACATTGGAAGAAACTGGGCAGAAGATATGCACGTACTTTACATGAAATTGAAAACATTTCCCGGGTGTTTGTGGAGAACTGTATGGAAAGTAGGACACGAAGACCCCAGAAGGATTATACACGCTTTGAAAGTTGGTTTGGCTTTAACTTTGGTTTCGTTGTTGTATCTGTTGGAGCCTTCGTTTAATGGGGTAGGAGAGAATGCTATCTGGGCTGCCATGACTGTCGTGGTCGTTCTTGAATTTACAGCAGGTGCAACATTATGCAAGGGACTTAATAGAGCCTTTGGGACTGTCTTGGCTGCAGGGTTGGCTGTGTTGATCGAATATATATCAAATTCATCAGGAAGGTTCTTCAAAGCTATCTTCATTGGAGCTGCAGTTTTTCTTATAGGAGCTGCATCTACTTACATGAGGTTCATCCCTCGAGTTAAGAAATATTACGACTATGGATTTGTGATATTCATTTTGACGTTTAACATGCTCGCTGTGTCAAGTTATCGAGTAGATGATCTCTTGAAGGTCGCAAAAATGCGATGCTTTATGATTGGCATAGGCTGTGGTTTATGTCTCTTGATGAGTCTGCTAGTGTTTCCAATTCGTTCAGGAGACTACCTTCATAACTCCATAGTCTCCAGATTTGAAGGCTTGGCTAAGTCAGTAGAAGTTTGCGTGAATGAGTATTTCAAAGATGGCGAGAACGGGGATTGTGGTGTGGAAGCAAAAAAAGACAAGTCGTCATCCGAAGACATCATATACAGAGGTTACAAGGTCGTTTTGGATTCCAAGTCTACTGATGAAACAATGGCATCATATGCGAGCTGGGAGCCAAGGTATTTGAAAAACTGTTGTCATTGTCCGTGGCAGCAATATGTGAAAGTGGGGACTGTTCTTCGCCAATTTGGCTGCACTGTCGTAGCACTGCATGGATGTTTAAATTCTGCTATTCAGGCACCAGGAACCGTTCGAACTCTGTTGAAGGATCCTTGCATAAGGGTTGCAGGAGCGGTCTCCAAACTTTTGATAGAACTAGCGAACAGCATAAGAAATCGAAGACAGTACTCTCCTGAAATCCTATACGACCAGCTGCACGAAGCCGTGCAGGAGATTAACAGTGCCATAAATTCTCAGCCGAGACTCTTCTTCGGTTCCAACAGCAACCACGGCACCAACATGTCAGCTGTAGCAGCTGCAGAAGGTGGGCAAAAGAAAGAAGATGAGAGTATTGTTTCACACCCAAGTTCTGAAACAAACTCATTTACTTTGCAAGAAACAAAAGCCAACGGTGTTTCAATGGAGCAGATAATGGTATATGAGAGGGAAACTGCAAGACCCCAAATGCATAGAAGGGCAATGACTAGTATGGAGTTTTCTGAAGCTCTTCCTCTTGCTGCATTCGCTTTTCAACTTGTGGACACAGTGGTAAAGCTAGATCAGGTTATAGGAGGAGTAGAAGAATTGGGGAGAATTGCATGCTTCAAAGAGTTCGAAAACGATGAGAAAATAATTGTTGTGTGCTGTGAGAATCTGCAACAAGATATAGCTGACAACCACGTACTTTCTCATGCAGCAGAATGA 1599 0.4303 MGRDESGNIGRNWAEDMHVLYMKLKTFPGCLWRTVWKVGHEDPRRIIHALKVGLALTLVSLLYLLEPSFNGVGENAIWAAMTVVVVLEFTAGATLCKGLNRAFGTVLAAGLAVLIEYISNSSGRFFKAIFIGAAVFLIGAASTYMRFIPRVKKYYDYGFVIFILTFNMLAVSSYRVDDLLKVAKMRCFMIGIGCGLCLLMSLLVFPIRSGDYLHNSIVSRFEGLAKSVEVCVNEYFKDGENGDCGVEAKKDKSSSEDIIYRGYKVVLDSKSTDETMASYASWEPRYLKNCCHCPWQQYVKVGTVLRQFGCTVVALHGCLNSAIQAPGTVRTLLKDPCIRVAGAVSKLLIELANSIRNRRQYSPEILYDQLHEAVQEINSAINSQPRLFFGSNSNHGTNMSAVAAAEGGQKKEDESIVSHPSSETNSFTLQETKANGVSMEQIMVYERETARPQMHRRAMTSMEFSEALPLAAFAFQLVDTVVKLDQVIGGVEELGRIACFKEFENDEKIIVVCCENLQQDIADNHVLSHAAE* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00252 532 Pfam Aluminium activated malate transporter 36 495 IPR020966 GO:0015743
Pte12g00252 532 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 30 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00252 Pte-Chr12 2019733 2023177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00252 23 516 Miscellaneous Gene Families AT4G17970 53.846 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00252 K25841 - qsa:O6P43_024473 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00252 12 2019733 2023177 Pte12g00252 12 2019733 2023177 RCT