Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00204 ATGGTTCCAAAGCCAGTGCTTGCTGTGTTATTTCTCTATCCAATAACCACAAAGACGGAAGAAGATAGATTGCGGCAGGATAGTGAGAAGGAACATAGTCCTAATTTATATTTTATGAAACAAACTGTGGGGAATGCGTGTGGCACCATTGGACTTCTTCATGCTGTTGGGAATATAACTTCCGAGATCAAGCTCTCTGAAAATTCATTCCTTGATAGATTTTTCAAGTCCACGGCAAAGATGGATCCATTACAGCGTGCAGCATTTCTTGAGAATGACAGAGAAATGGAGGTTGCTCATACTGTAGCTGCAAGTGCTGGTGAGACAGAGGCATCAGATAACGCGGATGCCCATTTCATCTGCTTTGTTTGTGTGGACGGCCAGTTATATGAGTTAGATGGAAGAAAATCAGGTCCTATATGTCATGGTTCATCCACACCAAGTACTTTATTGAAGGATGCTGCACATGTCATTAAGAGCGAGATCCAGAAGAATCCCGAGTCACTCAATTTCAATGTCATTGCCATTTCCAAGAAATCAGATCAACTTGCTTAG 555 0.4198 MVPKPVLAVLFLYPITTKTEEDRLRQDSEKEHSPNLYFMKQTVGNACGTIGLLHAVGNITSEIKLSENSFLDRFFKSTAKMDPLQRAAFLENDREMEVAHTVAASAGETEASDNADAHFICFVCVDGQLYELDGRKSGPICHGSSTPSTLLKDAAHVIKSEIQKNPESLNFNVIAISKKSDQLA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00204 184 FunFam Ubiquitin carboxyl-terminal hydrolase 1 179 - -
Pte12g00204 184 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1 179 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 SUPERFAMILY Cysteine proteinases 1 178 IPR038765 -
Pte12g00204 184 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 5 162 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 Gene3D - 1 179 IPR036959 GO:0004843|GO:0006511
Pte12g00204 184 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 41 58 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 2 14 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 113 124 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 129 139 IPR001578 GO:0004843|GO:0006511
Pte12g00204 184 CDD Peptidase_C12_UCH_L1_L3 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00204 Pte-Chr12 1644045 1648200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00204 K05609 - qsa:O6P43_024389 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00204 12 1644045 1648200 Pte12g00204 12 1644045 1648200 RCT