Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00162 ATGGCTCCTAAGACTGTTGCATCGTCGGCAGCCATTCTCATTTCTCTTAATCTACTCTTTTTCACAATGGTGAGCTCCACTTATGTTCCTTGCCCACCACCACCTCATCATCATCCCAAGCCACCAGCCCCTAAACCAACTTGTCCCAAGGACACCCTGAAGTTGGGTGTATGTGCCAATGTGCTAAAAAATTTGTTGAACATTGAGCTTGGTAAGCCACCCAAGACCCCTTGCTGCAGCCTCATTGAGGGTCTCGTGGATCTTGAAGCTGCTGTCTGCCTGTGCACCGCTCTTAAAGCTAATATCCTCGGCATTAATCTCAATGTTCCCATTTCATTGAGCTTACTGTTGAACTACTGTGGAAAGGGAATACCCTCCGGTTTCCAATGCCCATAG 396 0.4773 MAPKTVASSAAILISLNLLFFTMVSSTYVPCPPPPHHHPKPPAPKPTCPKDTLKLGVCANVLKNLLNIELGKPPKTPCCSLIEGLVDLEAAVCLCTALKANILGINLNVPISLSLLLNYCGKGIPSGFQCP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00162 131 PANTHER - 8 130 - -
Pte12g00162 131 Pfam Hydrophobic seed protein 47 131 IPR027923 -
Pte12g00162 131 CDD HPS_like 51 130 IPR027923 -
Pte12g00162 131 Gene3D - 46 131 IPR036312 -
Pte12g00162 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 131 IPR036312 -
Pte12g00162 131 FunFam pEARLI1-like lipid transfer protein 1 46 131 - -
Pte12g00162 131 SMART aai_6 48 130 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00162 Pte-Chr12 1385529 1385924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00162 1 132 Acyl Lipid Metabolism Gene Families AT4G22520 31.579 3.94e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00162 - - jre:109011545 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00162 12 1385529 1385924 Pte12g00162 12 1385529 1385924 RCT