Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00161 ATGGCTTCCAAGACTTCTGCTTCCATCGCTCTCTTTTTTGCCGTCAACATCCTCTTCTTTGCACTTGTAAGTGCCTGTGGCTCATGCCCAAGTCCTAAGCCAAAGCCAAAGCCAAAGCCAAAACCTTGCCCCAGCCCAAACCCTAACCCAAACCCCAACCCCACTCCCTCCCCTGGCACTGCTACTTGCCCTAGGGACGCTCTCAAATTGGGGGTTTGCGCTAATGTGCTGAATGGCTTGCTCAATGTCACTTTAGGAACTCCACCAGTAGCTCCATGCTGCACTCTCATTCAAGGACTTGCTGACCTTGAAGCAGCAGTTTGCCTTTGCACCGCTCTTAAAGCTAATATTTTGGGCATCAACCTCAACCTTCCTATCTCCCTTAGCTTGCTCCTCAACGTTTGTTCAAAGAATGTCCCACGTGATTTCCAGTGTGCCTGA 441 0.5034 MASKTSASIALFFAVNILFFALVSACGSCPSPKPKPKPKPKPCPSPNPNPNPNPTPSPGTATCPRDALKLGVCANVLNGLLNVTLGTPPVAPCCTLIQGLADLEAAVCLCTALKANILGINLNLPISLSLLLNVCSKNVPRDFQCA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00161 146 Gene3D - 60 146 IPR036312 -
Pte12g00161 146 SMART aai_6 63 145 IPR016140 -
Pte12g00161 146 MobiDBLite consensus disorder prediction 35 60 - -
Pte12g00161 146 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pte12g00161 146 MobiDBLite consensus disorder prediction 35 59 - -
Pte12g00161 146 FunFam pEARLI1-like lipid transfer protein 1 61 146 - -
Pte12g00161 146 CDD HPS_like 60 145 IPR027923 -
Pte12g00161 146 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 65 145 IPR036312 -
Pte12g00161 146 PANTHER - 6 145 - -
Pte12g00161 146 Pfam Hydrophobic seed protein 62 146 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00161 Pte-Chr12 1379149 1379874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00161 53 145 Acyl Lipid Metabolism Gene Families AT4G22490 37.634 8.11e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00161 - - cit:102617861 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00161 12 1379149 1379874 Pte12g00161 12 1379149 1379874 RCT