Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00160 ATGGCTTCCAAGACCTCTGCTTCCATTGCTCTCTTTTTTGCTGTAAACATCCTCTTCTTTGCACTTGTCAGTGCATGTGGCTCATGCCCCACTCCTAAGCCAAAGCCAAAACCCAACCCCAAACCAACTCCATACCCTGGTTCGCCTGGTACTGCTACTTGCCCTATGGATGCTCTCAAATTGGGGGTTTGCGCTAATGTGCTGAATGGCTTGCTCAATGTCAATTTAGGAACTCCACCAGTAGCTCCATGCTGCACTCTCATTCAAGGACTTGCTGACCTTGAAGCAGCAGTTTGCCTTTGCACCGCTCTTAAAGCTAATATTTTGGGCATCCACCTCGACGTTCCTCTCTCCCTTACGTTGCTCCTCAACGTTTGTTCAAAGCATGTACCACATTTCCAGTGTGCCTGA 411 0.4866 MASKTSASIALFFAVNILFFALVSACGSCPTPKPKPKPNPKPTPYPGSPGTATCPMDALKLGVCANVLNGLLNVNLGTPPVAPCCTLIQGLADLEAAVCLCTALKANILGIHLDVPLSLTLLLNVCSKHVPHFQCA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00160 136 PANTHER - 6 135 - -
Pte12g00160 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 135 IPR036312 -
Pte12g00160 136 SMART aai_6 54 135 IPR016140 -
Pte12g00160 136 Gene3D - 51 136 IPR036312 -
Pte12g00160 136 CDD HPS_like 51 135 IPR027923 -
Pte12g00160 136 FunFam pEARLI1-like lipid transfer protein 1 52 136 - -
Pte12g00160 136 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pte12g00160 136 MobiDBLite consensus disorder prediction 31 49 - -
Pte12g00160 136 Pfam Hydrophobic seed protein 53 136 IPR027923 -
Pte12g00160 136 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00160 Pte-Chr12 1372417 1372827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00160 39 135 Acyl Lipid Metabolism Gene Families AT4G22490 38.776 4.29e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00160 - - qsa:O6P43_034106 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00160 12 1372417 1372827 Pte12g00160 12 1372417 1372827 RCT