Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00158 ATGCGTGTGAAAGAAATGCATCCTTTGTGTTGTATAACAATGGAGAGTCCCGGAATCGGAGACCAGTCGCCGGAGGCTTCGCTTTCAAGGACAAGGAGCTTGCCTGCTAGTTTTCCCGGTGTGGGATCTGAGCCGAATGGTATCGTCGGGGGTCGAACTCAAGGATCCGAGGTCACCGTTGCCGGCGTCCTTTACAAGTGGACTAATTACGGGAAAGGCTGGAGATCCAGGTGGTTTCTCTTGAAGAATGGCGTTCTGTCCTATGCCAAGATCCAATGGCCGGAGAATCTTAACCTTCTAACTCCCACTGACGACGTCAAACTGATCGGAGAAATTTCGACCAATCGGCTCGCAAGGATGGTCAGCGGCAGTTCCATGAGACGTAAGCACCATAAAACTTCTCCTGGTGTTGTTCATCTTAAGCAGGTCTCCTCTTTTAGAGAGAGTAAGTCGGATGATAGGCGGTTCTATGTATTCACCGCAACGAAAACTCTTCACCTCAGAACAGACTCAAGGAGAGATCGAGTAGCTTGGATTGAAGCTTTAGTGCTAACTCGCAACCTATACCCAATAGGCCCACTGAACAATGCGTCCCTCATACCGGAAGATTTTTCTGTATCAACTGAAAGGCTGAAGAAGCGCTTACTTGAAGAGGGAATAAACGAGAACCTTGTAAAGGAGTGTGAGCAGATCGTCTGCTCCGAGTTCTCAGAAATACACGGACAACTCAAGGTTCTTTACGAGGAAAGATCAAGTTTGCTTGACACGTTAAGGCAGTTGGAGGCCGCAAATACTGAAGCTGAGGCATCGGGAATTCAGGATGGTGAATACCATTTAACAAAGCACGAAATTTCCAGTTTGAGGAGAGGAAAATACAGTGAATGCAGTACAACTGCTTCTTCAGACGACACCGAGAAACAAGAAATGGAGGACGTGTCGGATGAAGGTGAATTGTTGTTTTACGACAGCAAAGAGTATTTTGTTGAACCTTCTATGGAGACCCGCTCCTTAATGGAAGTTGTAACTCATAAGAATGAATGTGGGAAGGAGGAGGCCGATGAGCAATTAAATGACAAGATACAATCTAAGATAGAAATAGACAATTTTGGCTATCCAAATGTAGAAAGAAGAAGAAAGCTTCCTGATCCAGTTGAGAAGGAGAAGGGAACAAGCCTTTGGTCTATGATTAAAGATAATGTGGGAAAGGATCTCACTAGAGTCTGTCTTCCTGTATACTTTAATGAGCCTATATCATCCCTTCAGAAATGTTGTGAGGACTTGGAGTATTCTCACCTTCTGGATCGAGCATATGAGTATGGAAAATCGGGAAACAGTCTCCTTAGGGCTCTTAATGTCGCTGCTTTTGCAGTTTCTGGATATGCATCATCTCAAGGTCGACATTGTAAACCCTTCAATCCCCTCTTAGGGGAAACTTACGAAGCAGATTATCCTGATAAAGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCATCATCCAACGCTCATTGCCTGCCACTGTGAAGGTAGGGGTTGGAAGTTTTGGGCTGATAGTAATCTTCGGACAAAATTTTGGGGACAATCAATTCAGCTTGACCCTGAGGGCGTTTTAACTTTGGAATTTGATGATGGTGAAATATTTCATTGGAGCAAGGTTACCACTAAAATCTACAACCTTATCCTTGGTAAAGTTTACTGTGATCATCATGGTACCATGTATATACATGGAAATCGCCAATATTCTTGCAGACTAAAGTTCAAAGATCATTCCATACTAGATCGAAATCCTCACCAGGTACAAGGATTCGTTGAAGATCTTATGGGTAAAAAGGTTGCCACAATGATGGGCAAGTGGGATGAAAGTATGCATTATGTCATGTGTGATGCACCTAGTAAACCAAAAAGTTCTAATGTTTCATCTGATGCTTCATTGTTGTGGAGAAGAACTAAGCCTCCTTGTAATGTCACTCGTTACAACATGACCTCATTTGCAATCACACTGAACGAGCTAACACCAGGGTTGCAGGAAAAACTTCCGCCCACGGATTCTAGGCTCAGACCAGATCAACGGCATCTTGAAAATGGAGAGTATGAGAAGGCTAATGCGGAGAAACTAAGGCTGGAGAGGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGAAGGCAAGGTGGTTTGAGAGGGACGAAAATGGATCCTTTCGTTATATGGGTGGGTACTGGGAAGCTCGAGAGCTAGGAAAATGGGATGGATGTCCAAATATATTTGGCGAATTTAATGAAGATCTGGTTGATACACTGGAGGCATCCTGA 2313 0.4397 MRVKEMHPLCCITMESPGIGDQSPEASLSRTRSLPASFPGVGSEPNGIVGGRTQGSEVTVAGVLYKWTNYGKGWRSRWFLLKNGVLSYAKIQWPENLNLLTPTDDVKLIGEISTNRLARMVSGSSMRRKHHKTSPGVVHLKQVSSFRESKSDDRRFYVFTATKTLHLRTDSRRDRVAWIEALVLTRNLYPIGPLNNASLIPEDFSVSTERLKKRLLEEGINENLVKECEQIVCSEFSEIHGQLKVLYEERSSLLDTLRQLEAANTEAEASGIQDGEYHLTKHEISSLRRGKYSECSTTASSDDTEKQEMEDVSDEGELLFYDSKEYFVEPSMETRSLMEVVTHKNECGKEEADEQLNDKIQSKIEIDNFGYPNVERRRKLPDPVEKEKGTSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSHLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSQGRHCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNLRTKFWGQSIQLDPEGVLTLEFDDGEIFHWSKVTTKIYNLILGKVYCDHHGTMYIHGNRQYSCRLKFKDHSILDRNPHQVQGFVEDLMGKKVATMMGKWDESMHYVMCDAPSKPKSSNVSSDASLLWRRTKPPCNVTRYNMTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKLRLERRQRMSRKMQENGWKARWFERDENGSFRYMGGYWEARELGKWDGCPNIFGEFNEDLVDTLEAS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00158 770 SUPERFAMILY Oxysterol-binding protein-like 386 765 IPR037239 -
Pte12g00158 770 Pfam Pleckstrin homology domain 62 182 - -
Pte12g00158 770 Gene3D - 477 650 - -
Pte12g00158 770 FunFam Oxysterol-binding protein-related protein 2A 688 758 - -
Pte12g00158 770 Coils Coil 243 270 - -
Pte12g00158 770 Gene3D - 52 186 IPR011993 -
Pte12g00158 770 Pfam Oxysterol-binding protein 391 745 IPR000648 GO:0008289
Pte12g00158 770 SUPERFAMILY PH domain-like 55 183 - -
Pte12g00158 770 ProSiteProfiles PH domain profile. 57 187 IPR001849 -
Pte12g00158 770 MobiDBLite consensus disorder prediction 16 52 - -
Pte12g00158 770 FunFam oxysterol-binding protein-related protein 1D isoform X1 477 649 - -
Pte12g00158 770 Gene3D - 688 745 - -
Pte12g00158 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 59 744 IPR000648 GO:0008289
Pte12g00158 770 MobiDBLite consensus disorder prediction 20 36 - -
Pte12g00158 770 SMART PH_update 58 189 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00158 Pte-Chr12 1292499 1299639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00158 K20456 - qsa:O6P43_024320 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00158 12 1292499 1299639 Pte12g00158 12 1292499 1299639 RCT