Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00144 ATGGATCCAAAAACTGTGAAATCGGAGCTGGTGCTGATCCTAGACTACGGTTCTCAGTATACACATCTTATTACCCGCCGTATCAGAAGCCTCTCTATCTTCTCTCTCTGCATCTCCGGTACGTCTTCTCTGCAAACCATCACCGAGCTTAACCCCACTGTCGTCATCCTCTCAGGCGGGCCGCACTCAGTCCATGCTGCCGATTCGCCTAGTTTCCCTGATGGGTTCGTGGAGTGGGCAGAGTCCAAGGGCGTCTACGTGTTGGGCATTTGCTATGGTCTTCAGCTGATTGTCCAGAGGCTTGGTGGTGACGTGAAAGTCGGAGAGAAGCAAGAGTATGGAAGAATGGAGATTGAGGTTCAGAAGGCTTGCGGGCTGTTTGGTTCTAGGAGTGTTGGGGATAAACAGCTCGTTTGGATGAGTCATGGTGATGAGGTATCTAAATTGCCTCCTGGATTCGAGGTGGTGGCACGAAGTCAACAGGGAGCTGTAGCTGCTCTAGAGAACCAAGCCAAGAGGTTTTATGGCCTCCAGTATCATCCTGAGGTGACACACACACCAGAAGGAATGGAAACGTTGAGATGTTTCTTGTTTGAAGTTTGTGGGGTGACGGCTGGCTGGAAGATGGAGAACTTGTTGAATGAAGAAATTAATGTGATAATAGATACGGTAGGGCCTGAAGAGCATGTGATATGTGCATTGTCTGGGGGTGTTGATTCCACTGTGGCTGCTACTGTTGTGCATAAAGCCATTGGTGATAGGCTTCACTGTGTTTTTGTTGACAATGGTCTGCTAAGATATAAGGAGAGAGAACGTGTGATGGAAACTTTTGAAAGAGATCTTCATTTACCTGTTACCTGTGTTGATGCAACAGATCAGTTTCTTAGCAAACTAAAAGGTGTGGTAGATCCTGAGATGAAAAGGAAAATCATCGGTAGAGAATTTATTAGTATCTTTGATGCCTTTGCTCAAGAATTGGAGCATAAATTTGGGAGAAAACCTTCTTACTTAGTTCAAGGAACTCTCTATCCTGATGTTATTGAATCTTGTCCCCCACCTGGAAGTGGAAGAACACACTCTCACACTATAAAGAGCCATCATAATGTTGGAGGGCTTCCAAAAGACATGAAACTGAAAATCATAGAACCTTTAAAGCTTCTATTCAAGGATGAGGTTCGCGAACTAGGGAAGATCTTAAATGTTCCTGAAGGATTTTTGAAGCGTCATCCGTTCCCTGGACCTGGCCTTGCAGTGAGAATATTGGGAGATGTTACTGATGGCAATGCTTTAGATATCCTTCGCCAGGTTGATGAAATTTTCATTCAATCAATAAAGGATGCTGGGCTTTATGATTCAATATGGCAGGCTTTTGCTGTATTCTTACCCATTAGGTCTGTGGGAGTTCAAGGTGATCAGCGAACACATTCGCATGTTGTCGCTCTACGAGCTGTTACTAGTCAGGATGGGATGACAGCAGACTGGTACAACTTTGAGCATAAATTCCTTGATGATGTTGCCAGAAAAATCTGTAATAGCGTTCGTGGTGTAAACCGTGTTGTTCAAGACATCACGTCAAAGCCTCCCTCAACAATAGAATGGGAATGA 1605 0.448 MDPKTVKSELVLILDYGSQYTHLITRRIRSLSIFSLCISGTSSLQTITELNPTVVILSGGPHSVHAADSPSFPDGFVEWAESKGVYVLGICYGLQLIVQRLGGDVKVGEKQEYGRMEIEVQKACGLFGSRSVGDKQLVWMSHGDEVSKLPPGFEVVARSQQGAVAALENQAKRFYGLQYHPEVTHTPEGMETLRCFLFEVCGVTAGWKMENLLNEEINVIIDTVGPEEHVICALSGGVDSTVAATVVHKAIGDRLHCVFVDNGLLRYKERERVMETFERDLHLPVTCVDATDQFLSKLKGVVDPEMKRKIIGREFISIFDAFAQELEHKFGRKPSYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKIIEPLKLLFKDEVRELGKILNVPEGFLKRHPFPGPGLAVRILGDVTDGNALDILRQVDEIFIQSIKDAGLYDSIWQAFAVFLPIRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYNFEHKFLDDVARKICNSVRGVNRVVQDITSKPPSTIEWE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00144 534 FunFam GMP synthase [glutamine-hydrolyzing] 419 534 - -
Pte12g00144 534 FunFam GMP synthase [glutamine-hydrolyzing] 208 418 - -
Pte12g00144 534 Gene3D - 4 204 IPR029062 -
Pte12g00144 534 NCBIfam glutamine-hydrolyzing GMP synthase, N-terminal domain 11 203 IPR004739 GO:0003922|GO:0005524|GO:0006177
Pte12g00144 534 Pfam Glutamine amidotransferase class-I 13 199 IPR017926 -
Pte12g00144 534 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 10 206 - -
Pte12g00144 534 SUPERFAMILY Class I glutamine amidotransferase-like 10 209 IPR029062 -
Pte12g00144 534 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 413 534 - -
Pte12g00144 534 CDD GATase1_GMP_Synthase 11 197 IPR004739 GO:0003922|GO:0005524|GO:0006177
Pte12g00144 534 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 207 408 IPR025777 GO:0003921|GO:0005524
Pte12g00144 534 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 196 427 - -
Pte12g00144 534 PANTHER GMP SYNTHASE-RELATED 10 534 - -
Pte12g00144 534 FunFam GMP synthase [glutamine-hydrolyzing] 8 205 - -
Pte12g00144 534 CDD GMP_synthase_C 229 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pte12g00144 534 Gene3D - 414 534 - -
Pte12g00144 534 NCBIfam glutamine-hydrolyzing GMP synthase, C-terminal domain 212 534 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pte12g00144 534 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 8 534 IPR022955 GO:0003922|GO:0006177
Pte12g00144 534 PRINTS Glutamine amidotransferase superfamily signature 55 64 - -
Pte12g00144 534 PRINTS Glutamine amidotransferase superfamily signature 176 189 - -
Pte12g00144 534 PRINTS Glutamine amidotransferase superfamily signature 86 97 - -
Pte12g00144 534 Gene3D HUPs 208 413 IPR014729 -
Pte12g00144 534 Pfam GMP synthase C terminal domain 443 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Pte12g00144 534 PRINTS Anthranilate synthase component II signature 11 25 - -
Pte12g00144 534 PRINTS Anthranilate synthase component II signature 176 189 - -
Pte12g00144 534 PRINTS Anthranilate synthase component II signature 55 64 - -
Pte12g00144 534 PRINTS Anthranilate synthase component II signature 86 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00144 Pte-Chr12 1134872 1138256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00144 K01951 - csv:101217911 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00144 12 1134872 1138256 Pte12g00144 12 1134872 1138256 RCT