Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00105 ATGGTTGTTGTTGCTCGTCCCGGTCCTTCATATGCAACACATTCTGAGATGGTACCTTGTGAACCTGGGAACAATATACTCTTTAGTTCGGGGAGCAATTATGATGCATTCAGGGTGAAGGAAATTTTCATTTGTTCTTCTCGCTTATCATGTAATTCTTCCATGAGGAAACAAGTTCTAAATATGGATTATATTGGAGGTGGAATTAAACGTGGCCATCAAGCCGTTGTTGCCGCCAGCCCACCTACAGAAGATGCTGTAATAGTTACCGAGCCTCTTACAATAGAGGATCTCGTGGGATACCTTGCATCTGGTTGTAAACCCAAGGAAAATTGGAGAATTGGTACAGAGCATGAGAAGTTTGGTTTTCAGTTTGAAAATCTACGCCCTATGGACTATGAGCAAATAGCGGAGTTGCTTTATGGAATTTCTGAGAGATTTGATTGGGAAAAACTTGTGGAAGAAGATAAGATTATTGGACTCAAACAGGGGAAGCAAAGTATATCACTGGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCACCACTTGAGACATTACATCAAACTTGTGCTGAAGTTAACTCGCATCTTTATCAGGTAAAAGCCGTTGCCGAGGAGATGGGAATCGGGTTTCTAGGAATTGGTTTCCAGCCTAAATGGGGACTCAAAGACATACCTATAATGCCTAAGGGAAGATATGAGATTATGCGAAATTACATGCCAAAAGTCGGCTCTCTTGGTCTGGACATGATGTTTAGAACATGCACAGTACAGGTTAATCTAGACTTTGACTCTGAAGCAGACATGATCAGAAAATTTCGTGCTGGTCTAGCGCTGCAGCCGATAGCAACTGCACTATTTGCAAATTCGCCTTTTACTGAGGGAAAGCCTAATGGCTTTCTCAGTATGAGAAGTCAAATTTGGACAGATACTGACAAAGATCGCACTGGGATGCTGCCTTTTGTTTTTGATGACTCCTTTGGATTTGAGCGATATGTTGATTATGCACTTGATGTGCCAATGTATTTTGTATATCGGAAAAAGAAGTATATTAACTGCACTGGATCAACCTTCCGCGACTTTTTGGCAGGAAAGCTTCCATGTATTCCAGGTGAGCTGCCAACCCTTAATGACTGGGAGAATCACTTGACTACAATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAAATGAGGGGGGCTGATGGAGGTCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTTGGCTTGCTATACGATGAAGTTTCTTTGCAAAAGGTACTGGACATGACAGCTGACTGGACCCCAGAAGAACGAGAAATGCTGAGGAGAAAGGTTCCCGTAACTGGTCTAAAGACACCATTCCGAGATGGCTTGTTGAAGCATGTGGCAGAGGATGTTCTGCAGTTGGCGAAGAATGGCTTGGAAAGGAGAGGATATAAGGAAACAGGGTTCTTGAACGAAGTTGCTGAAGTAGTGAGAACAGGTATGACCCCAGCTGAAAAGCTTTTGGATCTATACCATGGAAAGTGGGGGCTATCTGTAGATCCCGTTTTTGAGGAGCTACTTTACTGA 1581 0.4326 MVVVARPGPSYATHSEMVPCEPGNNILFSSGSNYDAFRVKEIFICSSRLSCNSSMRKQVLNMDYIGGGIKRGHQAVVAASPPTEDAVIVTEPLTIEDLVGYLASGCKPKENWRIGTEHEKFGFQFENLRPMDYEQIAELLYGISERFDWEKLVEEDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFDSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFLSMRSQIWTDTDKDRTGMLPFVFDDSFGFERYVDYALDVPMYFVYRKKKYINCTGSTFRDFLAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQKVLDMTADWTPEEREMLRRKVPVTGLKTPFRDGLLKHVAEDVLQLAKNGLERRGYKETGFLNEVAEVVRTGMTPAEKLLDLYHGKWGLSVDPVFEELLY* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00105 526 FunFam Glutamate--cysteine ligase 78 526 - -
Pte12g00105 526 Pfam Glutamate-cysteine ligase family 2(GCS2) 148 436 IPR006336 GO:0004357|GO:0042398
Pte12g00105 526 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 59 526 IPR035434 GO:0004357|GO:0006750
Pte12g00105 526 PIRSF GCL 76 526 IPR035434 GO:0004357|GO:0006750
Pte12g00105 526 Gene3D - 78 526 - -
Pte12g00105 526 SUPERFAMILY Glutamine synthetase/guanido kinase 104 524 IPR014746 GO:0003824
Pte12g00105 526 NCBIfam glutamate--cysteine ligase 92 526 IPR011556 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00105 Pte-Chr12 883988 888596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00105 K01919 - qsu:111985770 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00105 12 883988 888596 Pte12g00105 12 883988 888596 RCT