LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte12g00102	ATGATGAACAACCTTAAGCTGGGTGTCGAAGTGGTAGGTGCTCACAATCTCTTGCCTAAAGATGGCCAAGGTTCATCCAATGCCTTTGTGGAACTTTACTTTGATGGACAGAAATTTCGAACCACAATCAAAGAGAAGGATCTCAACCCTGTATGGAATGAGAGCTTCTACTTCAATATTTCTGATCCTTCAAAACTTCCCTATCTCATACTTGATGCCTATGTCTACAACGATGTCAAAGCTACCAACTCTAGGTCCTTTCTCGGGAAGGTTAGCCTTACTGGAACTTCTTTTGTTGCCTATTCTGATGCTGTCGTCTTGCACTATCCAGTGGAAAAGCGTGGCATATTCTCCCGTGTCAGAGGAGAACTTGGCCTTAAAGTGTATATAACTGATGACTCAACCATTAAGTCCTCCTCTGCAGTGGCTGCTGCTCAGTCCTTACAAAATAAAGATCCAAGCTTCATGCATGCAGGAGCTCATGCACCCCCGGAGATTCACACGGGGAAATTTTCTAATGATAAAATTGAGTCAAGACACACATTTCATGATCTCCCAAATCCAAATTATCACCGAAATCAACATCATCCTGCTGCTTCTGTTATAAGTCATGTGGCAAGACATGAGGCTGGGGAAAGGAAATTTGAACCGGAGCCCCTAAAGCTAGTTCGTGTGCATTCTGTCTTATCATCACAGCCAGTGGAGTATGCACTTAAAGAGACTAGCCCGTTCTTAGGTGGAGGCAGAGTTGTTGGGGGTCGTGATGCTAAGGGTAATGATGTTAATCTGGGTCACTACAAAGGGAAGGTCCTTTTGATTGTTAATGTTGCATCACAGTGTGGCCTCACTAATTCAAACTACACAGAGCTGAATCAGTTGTATGAAAAATATAAAGGCAAAGACTTTGAAGTTCTGGCATTCCCATGCAATCAGTTTGGTGGACAGGAGCCTGGGACCAATGAGCAGATAGTAGAATTCGCCTGTACTCGCTTTAAGGCTGAGTTTCCAATCTTCGACAAGGTTGAAGTCAACGGTTCCAACACTGCTCCAATCTACAAGTTTTTGAAATCAAGCAAAGGTGGGCTATTTGGTGATGATATCAAGTGGAACTTCGCCAAATTCTTGGTCGATAAAGATGGTAATGTTGTGGAACGCTATGCACCCACTACCTCACCTCTCAGCATTGAGAAGGATTTAGAGAAACTGCTCGGAACAGCTTGA	1221	0.4365	MMNNLKLGVEVVGAHNLLPKDGQGSSNAFVELYFDGQKFRTTIKEKDLNPVWNESFYFNISDPSKLPYLILDAYVYNDVKATNSRSFLGKVSLTGTSFVAYSDAVVLHYPVEKRGIFSRVRGELGLKVYITDDSTIKSSSAVAAAQSLQNKDPSFMHAGAHAPPEIHTGKFSNDKIESRHTFHDLPNPNYHRNQHHPAASVISHVARHEAGERKFEPEPLKLVRVHSVLSSQPVEYALKETSPFLGGGRVVGGRDAKGNDVNLGHYKGKVLLIVNVASQCGLTNSNYTELNQLYEKYKGKDFEVLAFPCNQFGGQEPGTNEQIVEFACTRFKAEFPIFDKVEVNGSNTAPIYKFLKSSKGGLFGDDIKWNFAKFLVDKDGNVVERYAPTTSPLSIEKDLEKLLGTA*	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte12g00102	406	Pfam	C2 domain	6	94	IPR000008	-
	Pte12g00102	406	PRINTS	Glutathione peroxidase family signature	266	283	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	PRINTS	Glutathione peroxidase family signature	367	376	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	PRINTS	Glutathione peroxidase family signature	302	318	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	SUPERFAMILY	C2 domain (Calcium/lipid-binding domain, CaLB)	6	139	IPR035892	-
	Pte12g00102	406	ProSiteProfiles	C2 domain profile.	1	109	IPR000008	-
	Pte12g00102	406	CDD	GSH_Peroxidase	255	399	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	CDD	C2A_MCTP_PRT_plant	6	132	-	-
	Pte12g00102	406	ProSitePatterns	Glutathione peroxidases signature 2.	305	312	IPR029760	-
	Pte12g00102	406	Gene3D	Glutaredoxin	252	405	-	-
	Pte12g00102	406	Gene3D	C2 domain	2	131	IPR035892	-
	Pte12g00102	406	SUPERFAMILY	Thioredoxin-like	255	404	IPR036249	-
	Pte12g00102	406	PANTHER	GLUTATHIONE PEROXIDASE	254	403	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	FunFam	Glutathione peroxidase	251	405	-	-
	Pte12g00102	406	ProSiteProfiles	Glutathione peroxidase profile.	254	406	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	ProSitePatterns	Glutathione peroxidases active site.	268	283	IPR029759	-
	Pte12g00102	406	FunFam	C2 calcium/lipid-binding plant phosphoribosyltransferase family protein	3	130	-	-
	Pte12g00102	406	Pfam	Glutathione peroxidase	254	356	IPR000889	GO:0004602\|GO:0006979
	Pte12g00102	406	SMART	C2_3c	6	107	IPR000008	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte12g00102	Pte-Chr12	856702	862198	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte12g00102	2	245	Lipid Metabolism Gene Families	AT4G00700	39.130	4.22e-43	159

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte12g00102	-		-	cave:132174755	374.785

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte12g00102	12	856702	862198	Pte12g00102	12	856702	862198	RCT