Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00063 ATGCCACCTTTTGGCTATGCGCCCTGTAATGGTTTGTTGAATCAAACTCTCAGACCAGATTCCAACGTTGTCTCGATTGATGTAGGGGGGCAAATCTTTCAAACCACGAAGCAAACTCTGAACTCAGCTGGTCCCACATCGCTCTTTTATTCCATATCTGAATCATCGTCTTCTTTTGCTCAAGTCAGTGTACCCTTCATAGACAGAGACCCTGAATTATTCTCTATCTTTCTTTCACTTCTCAGAAACGGTAGTCTTCCTTCCAAAGCCAAAGCTTACGATATTCAGGATTTGATTTTTGAGTCTCGGTTCTATGGGGTTGAGGCCCTTTTGATGAATTCTCTATCCAACCCTTCTCAGTTCGAACCATTCAATCTCGAGAGGTCGTTCATTTTGCCTCTCAATGGGAGAGACTCACCTTCTGCTATTGCGACCACGCGATTTGGCTCGTTGCACGTTGCGCACGGAAGCAAGATCACATCTTTTGATTGGTCTTTGCGACGGAAGTCTACCATTTTGACCCAATTCACCGCGGTCGATTCCCTCTTAGCGCTTTCACCGTCGGCGGTGGCTGCTGGTGCTACCGACTTCTCCGGGCTGCAAATTATTGATTTAGAAGAGGGTTTTGTGAAAAAGACTCTAAATTGGGAAAACGCGACCAGGTCCAGTTCTACAGTACAGGCCATTGGATCATCGCCTGAACTTTTATTTGCTAGTTTTGAATCAGGTAGAAGGAATTCAAACTCAATAATGGTTTATGATTTACAGAATTTAGTTCCTGTCACTGAGATTGGACGTTATGAGATTTATGGTGCTGAGCTTGATTCTGCGATCCCAGCCACAAAATTGAGATGGATTTCTAGTCACAATCTGCTAATGGCTTCTGGGTCTCATAGTGGACCTTCAGGAGTATCTGGCAACATAAAATTGTGGGATATACGATCTGGAAGTGTTGTGTACGATCTGAAGGAGAACTTGGACTGTTTTTCCGATGTTTCAGTCTCAGATGGCTTGTCCGTCATTTTCAAAATTGGTGTGAACTCAGGAGAGGCATTCTTTCTAGATATTCGAACTTTAGGAGCTGAAAATCCATGGGTATGTCTTGGGGATAGAAGGAAAATGATGTTCGGGAAGAAGGAAGGTTTTGGTTGCAAAACTGAGTGCCATGGAAATCAAGTGTTTTGCAGTAGAGGAGCGAATATAGAAATGTGGTCAGAGGTAGTGATAAGCTCCAAGAAAAATTCTGAAGAAGGTTCAGAGGGTAGGTTATTTAGGAAGAACTTGATGGGCAGAGCAAAAGATATGGGAGGTGCCGGGATATCCAATTTGGCCTTTGGAGGCAACAAAATGTTCTTGACGAGGAAAGACCACCAATGTGTTGAGGTTTGGCAGAGTTCATCCAGAGAAATTTGA 1413 0.4367 MPPFGYAPCNGLLNQTLRPDSNVVSIDVGGQIFQTTKQTLNSAGPTSLFYSISESSSSFAQVSVPFIDRDPELFSIFLSLLRNGSLPSKAKAYDIQDLIFESRFYGVEALLMNSLSNPSQFEPFNLERSFILPLNGRDSPSAIATTRFGSLHVAHGSKITSFDWSLRRKSTILTQFTAVDSLLALSPSAVAAGATDFSGLQIIDLEEGFVKKTLNWENATRSSSTVQAIGSSPELLFASFESGRRNSNSIMVYDLQNLVPVTEIGRYEIYGAELDSAIPATKLRWISSHNLLMASGSHSGPSGVSGNIKLWDIRSGSVVYDLKENLDCFSDVSVSDGLSVIFKIGVNSGEAFFLDIRTLGAENPWVCLGDRRKMMFGKKEGFGCKTECHGNQVFCSRGANIEMWSEVVISSKKNSEEGSEGRLFRKNLMGRAKDMGGAGISNLAFGGNKMFLTRKDHQCVEVWQSSSREI* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00063 470 Gene3D Potassium Channel Kv1.1; Chain A 14 122 IPR011333 -
Pte12g00063 470 Pfam BTB/POZ domain 24 113 IPR003131 GO:0051260
Pte12g00063 470 SMART BTB_4 22 122 IPR000210 GO:0005515
Pte12g00063 470 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 19 468 IPR045068 -
Pte12g00063 470 SUPERFAMILY POZ domain 21 113 IPR011333 -
Pte12g00063 470 SUPERFAMILY WD40 repeat-like 142 361 IPR036322 GO:0005515
Pte12g00063 470 Gene3D - 138 470 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00063 Pte-Chr12 593722 595929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00063 - - qsa:O6P43_034257 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00063 12 593722 595929 Pte12g00063 12 593722 595929 RCT