Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00062 ATGGCTAGGTTGGTTACGCCATGCAAGGGTTTGGCTTTTTCAAGGACCAGTCTAATGGGATTAATCTCCATTGCTCCTCTTCAATATACTTTCCGTTTTAGTTGTTCAGGAATTCCAGCGAAAAACAGTGTAAGATTTCTGTGTTGCCTTGCTTCAGAGGTTATCTATCGAAAGAAACACTCCACTTTGTACTATTCTGAATTGCGGGTTAAGAAACTCAGTAAGAGGTTAGTTTGTTCAGTGGCTACACAAACCTTACATAAGCCAACCGAAGAATCCCAAATGGAGACACCGAAAGAAATTTTTCTGAAGGATTACAAGATGCCTAATTACTACTTCGATACAGTGGATCTGAAGTTTTCATTGGGTGAGGATAACACTTATGTTAGTTCTAAGATAACTGTCTTCCCACGGGATGAAGGGTCTTCCCCTCCGCTGGTTTTGGATGGGCAAGACATGAAATTAATATCAATTAAAGTCAATGGCAATGCCTTGAAGGAGGGAGAGTACCATTTGAATGCAAGGCATTTGACTCTTCCATCTCCTCCTACTGGTAGTTTTACCCTAGAGATTGTTAATGAAATTTATCCACAGAAGAATACATCACTTGAGGGGCTTTACAAGTCATCTGGCAATTTCTGTACACAATGTGAAGCAGAAGGTTTCCGCAAAATTACATTCTATCAGGATCGACCTGATATCATGGCAAGATATACGTGTCGAATTGAAGCTGATAAGTTATTATATCCAGTGTTGTTATCCAATGGAAATCTTATAGAACAAGGAGAACTAGAGGGTGGCAAGCACTATGTACTTTGGGAGGACCCATTCAAGAAACCTTGCTATCTATTTGCCTTGGTAGCTGGACAGTTGCAGAGTAGAGATGACACTTTTACTACTCGCTCTGGGAGGAAGGTGTCGCTTAGGATTTGGACCCCTGCGGAAGATGTCCCAAAGACTGCACATGCAATGTACTCACTTAAGGAAGCAATGAAATGGGACGAAGATGTTTTCGGTCTTGAGTATGACCTAGATCTTTTCAACATTGTTGCCGTTCCAGATTTTAACATGGGAGCAATGGAGAATAAGAGTCTAAATATCTTCAACTCCAGACTTGTCTTGGCATCTCCAGAAACTGCTTCGGATGGAGATTATGCTGCAATATTAGGAGTCATTGGTCATGAGTACTTTCATAACTGGACTGGGAACAGGGTAACTTGTCGGGACTGGTTCCAGCTGAGCCTTAAGGAAGGTCTCACTGTTTTCCGGGATCAGGAATTTTCATCCGACATGGGAAGCCGTACTGTAAAGCGAATTGCTGATGTTTCACGGCTTCGCAATTCTCAGTTTCCCCAGGATGCAGGACCAATGTCTCATCCCGTTCGACCACATTCCTATATCAAGATGGACAATTTTTATACAGTGACGGTCTATGAAAAGGGAGCTGAAGTGGTTAGAATGTATAAAACCTTACTTGGAAGTCAAGGTTTCAGAAATGGCATGGATCTTTATTTTAAGAGACATGATGGACAAGCAGTAACATGTGAAGATTTTTTTGCGGCTATGAGAGATGCAAATGATACAGATTTTGCTAATTTCTTGTTATGGTACTCTCAAGCCGGGACACCTAGTGTCAAAGTAACATCATCTTACAATGCTGAAGCCCATACTTTTTCTTTGAAGTTCAGTCAAGAGGTACCACCCACTGCAGGACAACCTGTCAAAGAGCCCATGTTCATTCCTGTGTCAATTGGATTGCTTGATTCAGTTGGAAAGGACATTCCTCTAACTGCTCTGTATCACAATGGAACTTTGAAGTCCCTTTTAAGGAATGATCAACCAGTCCACACCACAGTTCTCCGGTTGACAAAGAAAGAAGAGGAGTTTGTTTTTTCGGATATAGATGAGCAGCCCATTCCATCTCTTTTGCGCGGCTATAGTGCTCCTGTCCGTCTTGAATCCGATCTGTCAGAGAGTGATCTGTTTTTCCTTCTTGCAAATGACTCAGATGAATTCAACCGTTGGGAGGCTGGGCAAGTTCTTGGGCGGAAATTGATGCTCAATTTAGTGGCTGATTTCAAACAGAACAAGCCTTTGGTTCTAAACCCAAAGTTTGTGCATGGGATCGCGACCATACTGTCTGACTCAAGTTTGGATAAAGAATTTGTTGCAAAGGCAGTAACCCTGCCCAGTGAAGGGGAAATCATGGACATGATGGAAGTTGCAGACCCTGACGCTGTTCATGCAGTTCGAACTTTCATCAGAAAACAACTTGCAAGTGAACTGAAACTAGAGTTCCTCAGCATTGTGGAGAATAATAGGAGCTCTGAAGAATATGTGTTTGACCATCCAAACATGGCTAGGCGTGCACTTAAGAATGTGGCACTAGCATATCTTGCATCTCTGGATGATCCAGAACTAATGAACCTGACCTTGAATGAGTATAAAGCCGCTACAAATATGACTGAGCAGTTTGCAGCTTTAGCAGCCATTGCGCAGAATCCTGGTAAAACTCGTGATGATGTTCTAGCTGACTTCTACTCAAAATGGCAGCATGACTATTTGGTTGTGAATAAATGGTTTGCACTTCAAGCTATGTCTGACATTCCCGGCAATGTTGAGAATGTGCGGAAACTCTTGAATCACCCGGCATTTGACTTGCGAAATCCAAACAAGGTTTACTCCCTCATTGGAGGTTTCTGCGGGTCCTTGGTAAATTTCCACGCAAATGATGGCTCTGGTTACAAGTTTTTGGGAGAAATAGTTATGCAACTTGACAAAATCAATCCTCAGGTAGCTTCGCGAATGGTATCAGCCTTCTCTAGATGGAAACGATATGATTCATCTCGACAGGCTCTCGCAAAGGCACAGCTAGAGATGATAATGTCTGCCAATGGACTGTCGGAGAATGTATATGAGATTGCCTCCAAAAGTTTAGCTGTTTAA 2946 0.424 MARLVTPCKGLAFSRTSLMGLISIAPLQYTFRFSCSGIPAKNSVRFLCCLASEVIYRKKHSTLYYSELRVKKLSKRLVCSVATQTLHKPTEESQMETPKEIFLKDYKMPNYYFDTVDLKFSLGEDNTYVSSKITVFPRDEGSSPPLVLDGQDMKLISIKVNGNALKEGEYHLNARHLTLPSPPTGSFTLEIVNEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMARYTCRIEADKLLYPVLLSNGNLIEQGELEGGKHYVLWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPAEDVPKTAHAMYSLKEAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSRLVLASPETASDGDYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNSQFPQDAGPMSHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRNGMDLYFKRHDGQAVTCEDFFAAMRDANDTDFANFLLWYSQAGTPSVKVTSSYNAEAHTFSLKFSQEVPPTAGQPVKEPMFIPVSIGLLDSVGKDIPLTALYHNGTLKSLLRNDQPVHTTVLRLTKKEEEFVFSDIDEQPIPSLLRGYSAPVRLESDLSESDLFFLLANDSDEFNRWEAGQVLGRKLMLNLVADFKQNKPLVLNPKFVHGIATILSDSSLDKEFVAKAVTLPSEGEIMDMMEVADPDAVHAVRTFIRKQLASELKLEFLSIVENNRSSEEYVFDHPNMARRALKNVALAYLASLDDPELMNLTLNEYKAATNMTEQFAALAAIAQNPGKTRDDVLADFYSKWQHDYLVVNKWFALQAMSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSLVNFHANDGSGYKFLGEIVMQLDKINPQVASRMVSAFSRWKRYDSSRQALAKAQLEMIMSANGLSENVYEIASKSLAV* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00062 981 FunFam Aminopeptidase N 377 540 - -
Pte12g00062 981 FunFam Puromycin-sensitive aminopeptidase 656 980 - -
Pte12g00062 981 Gene3D - 541 654 IPR038438 -
Pte12g00062 981 Gene3D - 292 376 - -
Pte12g00062 981 Gene3D Neutral Protease Domain 2 377 540 IPR027268 -
Pte12g00062 981 Pfam Peptidase M1 N-terminal domain 110 283 IPR045357 -
Pte12g00062 981 FunFam Aminopeptidase N 108 291 - -
Pte12g00062 981 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 547 - -
Pte12g00062 981 Pfam Domain of unknown function (DUF3458_C) ARM repeats 659 980 IPR024601 -
Pte12g00062 981 FunFam Aminopeptidase N 541 655 - -
Pte12g00062 981 Pfam Domain of unknown function (DUF3458) Ig-like fold 541 654 IPR035414 -
Pte12g00062 981 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Pte12g00062 981 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 93 980 IPR012779 GO:0008270
Pte12g00062 981 FunFam Putative aminopeptidase N 293 376 - -
Pte12g00062 981 CDD M1_APN 105 538 - -
Pte12g00062 981 Gene3D - 656 980 IPR037144 -
Pte12g00062 981 Pfam Peptidase family M1 domain 324 533 IPR014782 GO:0008237|GO:0008270
Pte12g00062 981 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Pte12g00062 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Pte12g00062 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Pte12g00062 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Pte12g00062 981 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Pte12g00062 981 NCBIfam aminopeptidase N 105 979 IPR012779 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00062 Pte-Chr12 583667 591540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00062 K01256 - pvy:116134076 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00062 12 583667 591540 Pte12g00062 12 583667 591540 RCT