Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00053 ATGAAATTGAACCAGAAAGTTTCAGAGAAAACAATTTGGGAGCAGATGAGAAGCTCATCTGGGGTGCCCATTGGCGGACCTGGTTCACAGTCATCTAGAGCTGTGCCTAAGATTTTGGTCTGGCTTATCCTCTTCGTTTCACTCACTTATGTCTTCTACACCTACAAGCTTGTCTCCACCTCGCGTGCCTGCAACCGTGAACCCTTCTCCACAACTCACAGAATTTCTTCGGTGACGATTCGGACTATTCCCAATACCACTGTCAATACTCCTTCCAGTTTATTTTCGATTCAAAAGCATGCGGTCACAGTTAGTCCACGCGAGACCCGGGAGACCCGTGAAGAAACGGAGCTCCGACACGTTGTGTTTGGTATCGCAGCTTCAGCTAAGTTATGGAAACAACGAAAGAACTACATCAAGCTGTGGTATAAGCCCGACAAGATGAGGGGTGTGGTTTGGCTTGACAACCCTGTGAGGACCGACAACAATGAAGGCCTCCCACCGGTGAAGATCTCCAGTGATACCTCCAAATTCTTATATAATAACAAGCAGGGTCATCGGTCTGCCATTCGGATCTCTCGGATAGTATCAGAGACTCTCAGACTAGGTCTCAAAGATGTGAGGTGGTTTGTGATGGGTGACGACGACACAGTGTTCATCACCGACAACCTCCTGAGGATTTTGAGGAAGTACGACCATAACCAGTTCTATTACATTGGGAGCTTATCAGAAAGTCACTTGCAAAACATATTCTTCTCTTACGGCATGGCCTACGGTGGAGGTGGCTTCGCCATTAGCTATCCATTGGCCAAAGCACTGCATCAAATGCAAGACCGTTGTATACAAAGGTACCCTGGTTTGTACGGTTCCGATGATCGAATGCAGGCATGTATGGCCGAACTCGGTGTTCCACTCACAAAAGAACTCGGTTTCCACCAGTATGATGTATACGGCAATCTGTTTGGGCTCCTTGCTGCTCATCCTGTGACTCCATTGGTATCGCTGCACCACCTGGATGTGGTTGAGCCAATCTTCCCCAATGTTACTCGGGTCAAAGCCCTCCAACGTCTTATGGTACCTGCAAAGCTAGACTCGGCAGGATTAATGCAACAATCTATCTGTTACGACAGTAGTAGGAAGTGGACAGTTTCCGTTTCATGGGGCTTTGCTGTTCAAATATTCCGTGGGATCTTTTCACCCAGAGAAATAGAAATGCCTTCACGAACATTTCTGAATTGGTACAGAAGAGCTGATTACACTGCATATGCATTTAACACACGTCCTGTTAGCCGAAATCCATGCCAGAAACCTTTTGTGTTCTACTTGTCAAATGCAACTTTTAATCCAAGGATGAACCTGACTTTGAGCGAATATATAAGTCATCGTGAACCTCATCCAGTATGCAGATGGAGAATGGCTGATCCTGCCAGTCTGGACAGAGTGGAGGTCTACAAAAAACCAGATCCTCATCTGTGGAATAGAGCTCCAAGAAGAAACTGTTGTAGAGTGCTAGAGTCTAAGAAAAAAGGAACCATGATAGTAGATGTGGGCAGATGCAATGAAGGCGAGGTGAGCGAGATCCGATGA 1587 0.465 MKLNQKVSEKTIWEQMRSSSGVPIGGPGSQSSRAVPKILVWLILFVSLTYVFYTYKLVSTSRACNREPFSTTHRISSVTIRTIPNTTVNTPSSLFSIQKHAVTVSPRETRETREETELRHVVFGIAASAKLWKQRKNYIKLWYKPDKMRGVVWLDNPVRTDNNEGLPPVKISSDTSKFLYNNKQGHRSAIRISRIVSETLRLGLKDVRWFVMGDDDTVFITDNLLRILRKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALHQMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVKALQRLMVPAKLDSAGLMQQSICYDSSRKWTVSVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYLSNATFNPRMNLTLSEYISHREPHPVCRWRMADPASLDRVEVYKKPDPHLWNRAPRRNCCRVLESKKKGTMIVDVGRCNEGEVSEIR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00053 528 PANTHER FRINGE-RELATED 36 524 - -
Pte12g00053 528 FunFam Fringe-related protein-like 108 362 - -
Pte12g00053 528 Pfam Protein of unknown function, DUF604 248 501 IPR006740 -
Pte12g00053 528 Gene3D - 108 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00053 Pte-Chr12 516130 519749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00053 1 522 Glycosyltransferase AT5G41460 68.750 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00053 - - qsa:O6P43_034269 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00053 12 516130 519749 Pte12g00053 12 516130 519749 RCT