Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00048 ATGAAGAAAGTTGTGTTGAAATTGGACTTGCACGATGACAGAGAAAAACAGAAGGCCATGAAAGCAGTTTCCAGTCTTTCTGGCATTGACTCCATAGCCGTGGACATGAAGGAGAAAAAACTTACTGTAGTCGGCGACGTAGACCCTGTTGATGTGGTCAGCAAATTACGTAAAACTTGGCGGGCAGAGATTTTGTCAGTTGGGCCACCAAAAGAGCCAGAAAAGAAGGAGGAAGCCAAGAAAGGTGATAAAAACAAGGATCAAGATCACATAGCAGAGCTTGTCAAAGCCTATGACGCATACAAATACAATCCTTATGTGACTTCCCATTATTTTGTTCCGAGTGCAGAAGAAAATCCAAATGCTTGTGTGATTTGTTAA 381 0.4199 MKKVVLKLDLHDDREKQKAMKAVSSLSGIDSIAVDMKEKKLTVVGDVDPVDVVSKLRKTWRAEILSVGPPKEPEKKEEAKKGDKNKDQDHIAELVKAYDAYKYNPYVTSHYFVPSAEENPNACVIC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00048 126 MobiDBLite consensus disorder prediction 67 88 - -
Pte12g00048 126 Pfam Heavy-metal-associated domain 9 60 IPR006121 GO:0046872
Pte12g00048 126 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 123 - -
Pte12g00048 126 Gene3D - 1 72 - -
Pte12g00048 126 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Pte12g00048 126 MobiDBLite consensus disorder prediction 68 88 - -
Pte12g00048 126 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00048 Pte-Chr12 487389 488631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00048 - - msin:131233032 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00048 12 487389 488631 Pte12g00048 12 487389 488631 RCT