Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00043 ATGAAGTGCCGTTCAGTGGCGTGCATATGGTCAGGCACGCCTCCACCGCAGCGAGTCACAGCCGTCGCTTCACTTAGCCAACCGCCGACTTTCTACACTGGTGGATCAGATGGCTCAATCATCTGGTGGAACATCTTGTTCTCCGATTCCAATCCCAATTCTCCGGAAATCAAACCGGTAGCGATGTTGTGTGGGCATGCATCAGCAATAACTGATATTGGCGTTTGTAGTCCCCTCACTGTCCCTGAAGAACACGCACAAGCTAGCAACAATTCAATATCCTGTTATGGTGATTTAATAAGTGCATGTAAGGATGGAATGTTGTGTGTGTGGAGCAGGAGTAGTGGACATTGCAGGTGCAGGAGAAAGTTGCCTTCTTGGGCGGGCAGTCCATCATTGATTAGGACTTTGCATTCAAGACCAAGATATGTATGCATTGGCTGTTGTTTCTTGGATGCTAACTTTTGTGAGCACAATAATTCTGAGTCTGCAGAAGGGAATCCAGGTGTCATGGATAGTGAGTCTCTGCAGCAAAAACCTTCAAAATGCACTATACTTGTCATTGACACTCGTTCGTTGTCTGTTATCCAAACCATTTATCAAGAGAACTTATCAATCGGACCGATGAAGTTCATGGAAGTGATTTCAGATGATAATGACAGAGAGGAACATTCTGTAGTCGTAGTTGATTCTGTTGGTAGGATACAAACAGTTTCACTGTTAAAGGATCCTCATGATGAGGTTGATACTTCAAAAATTTTGCATAAATGTGTTTCTCAGCCTGAAGTTTATGTCTGGGAAGAGGGATTGAGTGACCAGCAGCAAATTGTTTCAATTGCTATCAAAAGAAATATTGTTGCTTTTGTGCTGAAAAACCGCTGCATCTTTAGGCTCCTGAGTACTGGTGGGACAATTTCAGACATTTCTTTCCTTGAGAGTCTTTGCTCTGGTGGAGAAGATTCTGCTGCTCAACCTTACGTCGTGGGGGCCACGTTCCTTGAAAATTGTGATGCCTGGAATATCCCGAGTAACCACAGGTCGAATGAAGATGACGTTGAATATTTTGTTGCATGGAGCAGTAGAGGTGCAGCACTTGTATACGCAATTTCATTCTTAAATGACTCCCTAAAATGTGAACCTCATTGTGAGATTCCTGCTACTCATCGCCCCCTTACTAAAGGATTAAAAGTTATGTACTTTCAACTTAACCAGTATTTGCTTCGTGCTGAATCTATCTGCTTTCATATGAATGAGCCTTTGATGTGGAAGCCCCACGTTACATTGTGGTCTTTGCAGCATTTTGATGGGGGACGTGGACTAACGTGTCGAGAGTGCAATATGCTCGGTTGTGGTGGTTATTTGACTGACTGGTTCAAGAGATCTAGCATGCATATTAAGGAACTAGATGGTCGAGAAACAAAGTCAACTGATTCAGACTGCTTCACTCCAGGCAGAAAAGGTATCAATGATAATCGAGTAAACAATCTAAATGACGACAATGTTTATGAAGAACAGATCGTTTCATCTTCCATGGTTATTTTTGAAAACTTCTTTGCTCCTTATGCTGTTGTCTACGGCTTTGTCAATGGCAAAATAGAAGTTGTGCCCTTTGATTCATTTGAAGGGCTATCTTCACAGGCTGAAAGTCCAAGTCACGAGGAAAAATCAAATGCAAGCAAACAATATTTCTCAGGGCACAAAGGTGCTGTGCTTTGTTTAGCAGCACATCAAATGGTAGGGAATGACTCCGGGAGCATTTTGAATCGAATTTTGGTTTCTGGAAGCACAGACTCCACAGTTCGTATATGGGATCTTGATAGAGGGAATCTGATCATAGTTTTGCACCATCATGTGGCTCCTGTACGTCAAATCATTCTTCCCCCCTCTTTGACTGAGCGTCCCTGGAGTCATTGTTTCCTTTCAGTTGGAGACGACTTGTGCGTGGCTCTTGTTTCTCTTGAGACTCTTAGAGTAGAAAGAATGTTTCCTGGACACACCAACTATCCTGTTAAGGTTGTGTGGGATGGAGGAAGAGGTTATATTGCATCACTGTGCCAAGCACATTCAGGAGCATCTGATGCAGCTGTTGTTTTATACATCTGGGACGTGAAGACAGGTGCTCGAGAGCGAATCCTGCATGGTACTGCCGCTTATTCTATGTTTGATCATTTCTGTCAAAGCATAGACATGAAAGCCACTTCTGGTAAATTATTGAACAGCAATACATCTGTCTCTTCCCTGCTTCTTCCTTTAGTTGAAGATGGAAAATTGTCTCCTTCGCCCTCTAGTGTTTCAGAGATATTGACCATGTCATCATCTCCCCCGCAAAAAATTTCAAAAGCAACGGAGCTGGCTGCTGCTGGTAAAAGAAATTTTTCCAAACCATTGCCAACTTCTCTGTTTGACAATTGGAAGAACGAGCATCCTGTCAAATGCTCCTGCCCTCTCCCTGGTATTGTTGCTTTAAATTTTGATCTTGCATCATTGATGTTCTCTCATCAGAAGTATGAGTCGTCAGGAAGTGGGCTTATACAGGAGAATATCCATGTGAAGCAACATGGAAATGAGAGGCAAAGTCCTGCTAAGATAGGGGATAAGTCGGATGTGTGTAAGATACTCAAAAGTCATGCTGAAGAGCATTACTTGATTAGGTCATTTGAAGAGTATTTACTTCGATTTAGCTTGTCTTTTCTACACTTGTGGAATGTTGACCCAGAGCTTGACAATTTGCTAGTGAGTGACATGAAGCTGAAGAGACCAGAAAATTTCTTAGTAGCATCAGGTCTGCAAGGTGACAAAGGGTCGCTGACATTAACATTTCCGTGCCTAGATGCTATTCTTGAGCTTTGGAAATCATCAGCTGAGTTCAGCGCCATGAGGTGCCTAACAATGGTATCCCTGGCCCAACGTTTGATTTGCTTGTCTCACCCTAGTTCTGAAGCCAGCAGTGCTTTAGCAGCATTCTATACTCGGAATTTTATGGAAAAGCTTCCAGATATAAAGCCGCCTTCACTTCAGCTATTGGTAGGCTTTTGGCAAGATGAAAGTGAATATGTAAGTATGGCCGCACGCTCCATATTTCATTGCGCTGCCTCTAGGGCGGTTCCACTACCTCTATCCTGTTCAAAAGCTGTTGATGTAAGTACTGACCTCATAGCTGGAAATGCTGACAAAAAAAGTGAAGATTCAATGATGGAAAGCTTATCCAGCTATGCCTCATATTCTGATCCACTAGAAGAAAAACTGGGAATTCCACCTGCTGATCAATCCGAATTACTTGCTTGGTTGGAATCATTTGAGATTCAGGATTGGATTTCTTGTATTGGGGGAACGAGCCAAGATGTAATGACAGCACACATTATTGTTGCAGCAGCACTAGCAATATGGTACCCTAGCCTTGTGAAACCTAGTCTTGCCATGTTAGCTGTTCATCCTTTGATAAAGTTGGCTATGTCCATGAATGAGAAATATAGTTCTACAGCTGCTGAGCTCCTTGCTGAGGGTATGGAAAGTACATGGAAGCAATGCATTGACTCTGAGATACCTAGAATGATTGGTGATATATTCTTCCAAATTGAGTTGAGTGGTCCATCTGTCAATTCAGCTAAACGAGTTCCAGCTGCATCACTTTCTATTCGGAAGACTTTGGTTGAAGTTCTTCTTCCAAGTCTAGCTATTGCTGATATTCCTGGATTTTTGGCTGTTATAGAGAGCCAGATCTGGTCTACAGCATCTGACTCACCAGTGCATTTGGTATCACTTATGACTCTTGTAAGGGTTATGCGTGGCTCACCTAGAAATTTGGGCCAGTACCTTGACAAGGTGGTCAATTTCATTTTGCAGACAATTGATCCCAGCAATACAGTGATGCGAAAAACTTGCTTTCATAGTTCAATGACTGCTCTAAAAGAAGTTGTCCGTGAATATCCAATGGTTGCTCTGAATGAGACTTGGACAAGACTTGCAGTTGGTGACGTAATTGGTGAAATTAACCATGCAAGCATTCGGGTTTATGATATGCAAAGTGTAACAAAGATTAAACTTCTGGATGCAAGTGGCCCCGCTGGACTACCAAGTTTGCTTCCTGCAACATCAGAGACAACAGCGACTACTGCTATATCAGCATTGAGCTTTTCGCCTGACGGAGAGGGCCTGGTTGCTTTTTCGGAACATGGGATGATGATCAGATGGTGGTCATTGGGATCGGTTTGGTGGGAGAAACTGAGCCGAAATTTTGTTCCTGTTCAATGCACCAAACTCATTTTTGTTCCTCCGTGGGAGGGTTTCTCTCCAAAGTCTTCAAGATCAAGCATAATGGCCAACATATCAGGAAATGATAGACATTCCGTTGCTCAGGACAATGCAAGGGATGCAAACCCGGGAGACAGTTCTAAACAATTAATTCATAATCTTGATCTGTCTTATCGGCTAGGATGGACCGGTGAAAGGCAAGTGATTCTTACGAGGCATGGCCATGAATTGGGCATTTTTCAATTATAA 4500 0.4289 MKCRSVACIWSGTPPPQRVTAVASLSQPPTFYTGGSDGSIIWWNILFSDSNPNSPEIKPVAMLCGHASAITDIGVCSPLTVPEEHAQASNNSISCYGDLISACKDGMLCVWSRSSGHCRCRRKLPSWAGSPSLIRTLHSRPRYVCIGCCFLDANFCEHNNSESAEGNPGVMDSESLQQKPSKCTILVIDTRSLSVIQTIYQENLSIGPMKFMEVISDDNDREEHSVVVVDSVGRIQTVSLLKDPHDEVDTSKILHKCVSQPEVYVWEEGLSDQQQIVSIAIKRNIVAFVLKNRCIFRLLSTGGTISDISFLESLCSGGEDSAAQPYVVGATFLENCDAWNIPSNHRSNEDDVEYFVAWSSRGAALVYAISFLNDSLKCEPHCEIPATHRPLTKGLKVMYFQLNQYLLRAESICFHMNEPLMWKPHVTLWSLQHFDGGRGLTCRECNMLGCGGYLTDWFKRSSMHIKELDGRETKSTDSDCFTPGRKGINDNRVNNLNDDNVYEEQIVSSSMVIFENFFAPYAVVYGFVNGKIEVVPFDSFEGLSSQAESPSHEEKSNASKQYFSGHKGAVLCLAAHQMVGNDSGSILNRILVSGSTDSTVRIWDLDRGNLIIVLHHHVAPVRQIILPPSLTERPWSHCFLSVGDDLCVALVSLETLRVERMFPGHTNYPVKVVWDGGRGYIASLCQAHSGASDAAVVLYIWDVKTGARERILHGTAAYSMFDHFCQSIDMKATSGKLLNSNTSVSSLLLPLVEDGKLSPSPSSVSEILTMSSSPPQKISKATELAAAGKRNFSKPLPTSLFDNWKNEHPVKCSCPLPGIVALNFDLASLMFSHQKYESSGSGLIQENIHVKQHGNERQSPAKIGDKSDVCKILKSHAEEHYLIRSFEEYLLRFSLSFLHLWNVDPELDNLLVSDMKLKRPENFLVASGLQGDKGSLTLTFPCLDAILELWKSSAEFSAMRCLTMVSLAQRLICLSHPSSEASSALAAFYTRNFMEKLPDIKPPSLQLLVGFWQDESEYVSMAARSIFHCAASRAVPLPLSCSKAVDVSTDLIAGNADKKSEDSMMESLSSYASYSDPLEEKLGIPPADQSELLAWLESFEIQDWISCIGGTSQDVMTAHIIVAAALAIWYPSLVKPSLAMLAVHPLIKLAMSMNEKYSSTAAELLAEGMESTWKQCIDSEIPRMIGDIFFQIELSGPSVNSAKRVPAASLSIRKTLVEVLLPSLAIADIPGFLAVIESQIWSTASDSPVHLVSLMTLVRVMRGSPRNLGQYLDKVVNFILQTIDPSNTVMRKTCFHSSMTALKEVVREYPMVALNETWTRLAVGDVIGEINHASIRVYDMQSVTKIKLLDASGPAGLPSLLPATSETTATTAISALSFSPDGEGLVAFSEHGMMIRWWSLGSVWWEKLSRNFVPVQCTKLIFVPPWEGFSPKSSRSSIMANISGNDRHSVAQDNARDANPGDSSKQLIHNLDLSYRLGWTGERQVILTRHGHELGIFQL* 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00043 1499 SMART WD40_4 5 44 IPR001680 GO:0005515
Pte12g00043 1499 SMART WD40_4 607 652 IPR001680 GO:0005515
Pte12g00043 1499 SMART WD40_4 56 112 IPR001680 GO:0005515
Pte12g00043 1499 SMART WD40_4 556 604 IPR001680 GO:0005515
Pte12g00043 1499 SMART WD40_4 655 702 IPR001680 GO:0005515
Pte12g00043 1499 SMART WD40_4 1358 1399 IPR001680 GO:0005515
Pte12g00043 1499 Gene3D - 2 288 IPR015943 GO:0005515
Pte12g00043 1499 Gene3D - 527 786 IPR015943 GO:0005515
Pte12g00043 1499 ProSiteProfiles Trp-Asp (WD) repeats profile. 563 613 IPR001680 GO:0005515
Pte12g00043 1499 SUPERFAMILY WD40 repeat-like 16 714 IPR036322 GO:0005515
Pte12g00043 1499 PANTHER RABCONNECTIN-3B, ISOFORM A 3 1499 - -
Pte12g00043 1499 SUPERFAMILY WD40 repeat-like 14 310 IPR036322 GO:0005515
Pte12g00043 1499 ProSitePatterns Trp-Asp (WD) repeats signature. 591 605 IPR019775 -
Pte12g00043 1499 Pfam WD domain, G-beta repeat 563 604 IPR001680 GO:0005515
Pte12g00043 1499 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 563 609 - -
Pte12g00043 1499 SUPERFAMILY ARM repeat 943 1296 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00043 Pte-Chr12 465539 475579 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00043 K24738 - jre:108997416 1745.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00043 12 465539 475579 Pte12g00043 12 465539 475579 RCT