Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00016 ATGGAAAACAATCAGCAATCATTCTGGCAGTTCAGCGATCAGCTCCGCTTGCAGACATCCAATTTAGCTAACCTTTCTTTGAACGATTCCATTTGGAGTACCGGTTACATCAATAAGAGGCCCGATGATCGGAGGAACTTCGATATCAGGGTGGGGGGTGATCTCCACGGCGACGACTCCTTCTACTCCAGCTTGAGGCCTAAGGGGTGTGACTTCAACAGCAGCAGCAATGATATGAATGGATTCAACGTCAACGTCAACCTCGAGGGGTGGAAGATGCCACTGGCTAACTCTGGTATGGGCACCAATGGACTGGGTCTGGGTGGGTCTGGATCTGGATCTTACTCTCATAAGAGCCTGGCTTTGAACGGCGGGTTCAACAAGGGGATCGATTCCAAGCCTGGAAACCTAAATATGAATCCTATGAATGCTTTCAACGCGAATGTCCATAAATTGAATGGGAAGGGGCTGAAGGGCATCGCAGTGAAGAGCGACCCCGATCTTGACTTGTTGTACAAAGTCGGTAATAACAAGAAGAGCAACCATACGAGTACTGGTTTTAATAAGAAGATCGGAGGGGGTGAAAATAATAGCAATCATAACAACCAAGATAAAGAATCAAAAGGCGCTGCCGACAAGAGGTTCAAAACGCTGCCAGCATCTGAATCAATTCCTAGAGATGAGACCATCGGCGGTTATATCTTCGTCTGTAACAATGATACGATGCAAGAGAACCTGAAGAGACAACTTTTTGGTTTGCCACCGCGATACAGAGACTCCGTTCGCGCCATAACTCCAGGGTTACCTCTCTTCCTCTACAATTACTCTACCCATCAACTTCATGGTATTTTCGAGGCTGCCAGCTTTGGACGATCCAATATCGATCCAACGGCTTGGGAGGACAAAAAGAACCCTGGTGAATCACGCTTCCCTGCTCAGGTACGAGTCATCACCAGAAAAACTTGTGAGCCACTAGAGGAGGACTCCTTCAGGCCAATTCTCCACCACTACGATGGCCCTAAGTTCCGGCTCGAGCTCAATGTACCCGAGGCAATTTCCCTCCTGGATATATTTGCTGAGCAAGACTCTCCCATACTCATTGAGTAG 1107 0.4797 MENNQQSFWQFSDQLRLQTSNLANLSLNDSIWSTGYINKRPDDRRNFDIRVGGDLHGDDSFYSSLRPKGCDFNSSSNDMNGFNVNVNLEGWKMPLANSGMGTNGLGLGGSGSGSYSHKSLALNGGFNKGIDSKPGNLNMNPMNAFNANVHKLNGKGLKGIAVKSDPDLDLLYKVGNNKKSNHTSTGFNKKIGGGENNSNHNNQDKESKGAADKRFKTLPASESIPRDETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGRSNIDPTAWEDKKNPGESRFPAQVRVITRKTCEPLEEDSFRPILHHYDGPKFRLELNVPEAISLLDIFAEQDSPILIE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00016 368 MobiDBLite consensus disorder prediction 179 212 - -
Pte12g00016 368 PANTHER - 13 362 IPR044832 GO:0034976
Pte12g00016 368 SMART dcd 228 360 IPR013989 -
Pte12g00016 368 Pfam Development and cell death domain 231 358 IPR013989 -
Pte12g00016 368 MobiDBLite consensus disorder prediction 179 200 - -
Pte12g00016 368 ProSiteProfiles DCD domain profile. 228 360 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00016 Pte-Chr12 270571 273167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00016 - - tcc:18606734 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00016 12 270571 273167 Pte12g00016 12 270571 273167 RCT