Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00014 ATGGCGAGCTCTTCACCCGCTCTAACAGTCGTATCGTCTTCTAATGCGTCACTTTTGCTTCATCCCCCGCAACGTTTCTCTAGTTTTGAATCACAACGTGTTTCCTTAGCTTGTCAATGCTTTAGACCTATGTATCCATCAATATGGAAATCAAATTCCCTCTTGTACAAGCAGAGAAACAATCCCAGGTTTCACATCAAAGCCCAAGCTCTGGACTTCTCGGATTCAATATTTCAAGATGGATTCGGATCGAATGACGATTCTTCACTTTCTTCTGCACCGGGTTTGACAGCTTTAGAGGAAAAAGAGGAGCCACCGTGTCCTCCTGGACTCAGGCGCTACGAAACAATGGTTGTTCTGCGGCCGGACATGTCCGAGGACGAGCGAATTGCTCTGACCCAGAAGTACGAGGAGCTGCTTGTGGCTGGAGGCGGAATGTATATAGAAGTTTTCAACAGAGGAGTCATCCCATTGGCTTATACTATCAGGAAGAGAAACAGAGATGGGGAGCTGAACACTTACTTGGATGGCATTTACCTTCTTTTTACGTACTTCACAAAGCCTGAATCTCTGGGAATTCTTGAGGAAACACTCAAAGCAGATGATGATGCTATTCGATCAATGAGCTTTAAAGTTAGAAAAAGGAAGTATTGA 654 0.4465 MASSSPALTVVSSSNASLLLHPPQRFSSFESQRVSLACQCFRPMYPSIWKSNSLLYKQRNNPRFHIKAQALDFSDSIFQDGFGSNDDSSLSSAPGLTALEEKEEPPCPPGLRRYETMVVLRPDMSEDERIALTQKYEELLVAGGGMYIEVFNRGVIPLAYTIRKRNRDGELNTYLDGIYLLFTYFTKPESLGILEETLKADDDAIRSMSFKVRKRKY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00014 217 SUPERFAMILY Ribosomal protein S6 111 215 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pte12g00014 217 Pfam Ribosomal protein S6 114 211 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pte12g00014 217 FunFam 30S ribosomal protein S6 alpha, chloroplastic 110 217 - -
Pte12g00014 217 Hamap 30S ribosomal protein S6 [rpsF]. 111 214 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pte12g00014 217 Gene3D - 110 217 IPR014717 -
Pte12g00014 217 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 102 217 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pte12g00014 217 MobiDBLite consensus disorder prediction 85 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00014 K02990 - gmx:100305490 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00014 12 261371 263291 Pte12g00014 12 261371 263291 RCT