Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01539 ATGGCCGCCCCTTCTCCGTCCGATGGTAAAAGTGGCAATAGTGTTCGTGGACCTTCCGAGCTTGACAATGCCACGGGTGAGGAGTCTCAATTTTCAGGTTTCACTCCTGCCATGATTTTTCTCCTACTTACTACTCTCCTATGCACTCCTGCTTTGTCTGCTAACCATGAAGCTTCTGCTTTGTTTTCATGGCTACACAGTTCTTCTTCGTCACCCTTCCCATCTTTCTCCAACTGGAATATCCTTGACAACACTCCATGCAACTGGACCTCCATAACATGTTCACCTCAAGGTTTTGTCACAGAAATCAATATACAATCAATCACCCTTGAGCTTCCGTTGCTTTTCAATCTTTCTTCGTTCCGTTTCCTCCAAAAACTTGTTATCTCTGATGCTAATCTCACAGGAACAATTCCTAAAGAGATGGGGTATTGCTCTGAGCTCACTCTCATAGACCTTAGCACAAACAGTCTCGTAGGGTCTATCCCTGCAAGTATAGGCTATCTTAGAAACCTAGAGAGTTTGATTTTGAATTCCAATCAGCTCACTGGGAAAATCCCAGTTGAGCTAAGCAGCTGCATTGACCTCAGAAACTTGCTTCTCTTTGATAACCAGCTCAGTGGAACTCTCCCCACTGTGCTAGGAAAGTTGTCTAGACTTGAGGTACTAAGAGCTGGAGGGAACAAAGACATTCTTGGCAATATCCCTGCAGAGCTTGGTGACTGCAGCAACTTGACAGTGTTGGGACTAGCAGATACTAGAATATCAGGGTCCTTACCAACTTCTTTGGGTAGACTTAGAAAGCTTCAGACATTGTCTATCTACACCACAATGCTCTCTGGTGAGATTCCCCCTGATTTAGGTAACTGCTCTGAGCTTACCGACTTGTTTCTTTATGAGAACAGTCTATCAGGTTCAATCCCACCTGAGCTTGGTAACCTGCAAAAGCTGGAGAGGTTACTGCTATGGCAGAATAGTCTTGTTGGGTCTATCCCAGAAGAGATTGGTAACTGTACCAGCTTGAAAATGATTGATTTCTCTTTTAATTCTGTGTCTGGAACAATACCATTGTCCATAGGAGTCCTTACTGAACTTGAGGAGTTTATGATTAGCAATAACAATGTGTCTGGATCAATACCTTCCAATCTTTCAAATTGTACAAGCCTCATGCAACTTCAAGTTGATACAAATCAGATCTCTGGTTTGATACCTCCAGAGCTTGGGAAGTTGTCAAATCTCAATGTCTTGTTAGCTTGGGAAAACCAACTTGAAGGAAGCATTCCTTCAAGTTTGGCCAGCTGTAGCAATCTCCAACAAATAGATTTGTCTCACAATGCTCTTACTGGTAGTATCCCCACCGGCCTTTTTCAGCTCCAAAACCTCACAAAACTGCTCTTGATTTCCAATGACCTGTCAGGCACTTTGCCACCTGAAATTGGTAATTGCAGCTCTCTGATAAGGCTGCGGTTAGGAAACAACCGGATTGTTGGCGGCATTCCCAAAACAATTGGCAATCTAAAGAGCTTAAATTTTCTTGATCTATCCGGAAACCGTCTCTCTGGACAAGTGCCAGATGAGATTGGTAGCTGTACAGAATTACAGATGATAGACCTCAGCATCAATACCTTGGAAGGTCCACTGCCGCATACATTGGCATCTCTCTCTGGATTACAGGTACTAGATGCATCGTCTAATCAGTTTTCAGGTCGTATACCGGCGAGTATAGGTCGTCTTCTTTCATTGAACAAGTTAATCCTAAGCAGGAATTTATTGTCTGGACCTATTCCAGCTTCTCTTAGTCTATTTTCGAGCCTGCAACTGCTTGACCTCAGCAGCAATGATCTTACTGGAAGCATTCCAGTCGAAGTAGGTCGCATTCAAAGCCTGGAGATTGCTCTCAACCTTAGCTGCAATGCTCTTACTGGGCCAATCCCATCACAACTATCCGCATTGACCAAGCTTTCTGTGTTGGACCTGTCTTATAACAAATTGGAAGGAGACTTGAATCCACTTGGAGGGCTTGATAATCTCGTGTCTCTTAATATTTCTAACAACAATTTCACTGGTTATCTCCCTGACAATAAGCTTTTCAGGCAACTGTCAGCGAAAGATATAGCTGGAAATGAAGGTCTGTGTTCTTTGGGCCGGGACTCCTGTTTCTTAAGTAATGTTGGTGAAGCAGGAGCTACAAATGGCGTGGGAAAATCACGTAAGCTGAAATTCGCAATTGGATCATTGATTGTATTGACAATATTGATGGTTGTAATAGGAGTCATTGCGATGTTTAGAGCACGAAGAGCAATGAGAGGTGATGATGAATCAGAACTAGGAGATTCATGGCCATGGCAATTCACTCCATTTCAGAAGCTTAATTTCTCAGTGGAACAAGTATTAAGATGCTTAGTTGATGCGAATATAATTGGAAAAGGCTGCTCTGGGATTGTTTATCGAGCTGATATGGATAACGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAGTGGCAATGACGCCGAGCAATGGATGTAAGGACGAGAAAAGTGGATCAGTTCGTGACTCATTCTCAGCAGAAGTCAAGACTCTTGGCACAATTCGTCATAAGAACATTGTCAGGTTCTTGGGGTGTTGCTGGAATCGAAGCACCAAATTGCTCATGTATGATTATATGCCAAATGGAAGCTTGGGTAGCCTGCTCCATGAGAGAACTGGGAATTCATTGGACTGGGAACTCAGGTACCAAATCTTGCTGGGGGCAGCTCAGGGTCTTGCTTATTTACACCATGATTGTGTTCCTCCAATAGTCCACAGAGACATCAAAGCCAATAACATCCTTATTGGCCTTCAATTCGAACCTTACATCGCAGACTTCGGTTTAGCTAAGCTTGTCGATGACGGTGACTTTGCTCGGTCCTCCAACACAGTTGCTGGTTCTTATGGTTACATAGCTCCAGAATATGGTTATATGATGAAGATTACAGAGAAGAGTGATGTCTATAGCTATGGTGTAGTCATGTTGGAAGTCTTGACAGGAAAGCAACCAATTGATCCAACCATACCAGATGGAGTACATGTCGCTGACTGGGTGAGACAACAAAGAGGCGGAGTAGATGTCTTGGATCCTAGTCTGGTATCAAGACCAGAATCAGACATGGAGGAAATGAAGCAGGCACTAGGCATAGCTTTGTTGTGTGTAAATTCATCACCTGATGATAGACCAACCATGAAAGATGTGGCTGCATTACTCAAAGAAATTAAACATGAAAGAGAAGATTATTCAAAGGTTGATGTAATTCTCAAAGGTTCTCCTGCAAATGCTGATCAAGCAAATCAACACTCCAGCAAAGTTCCTGCATCTTCATCTTCAGCATCAGTAATGCAAAAGCTTTATCCAAAGAGCAATAACACAAGCTTCTCTGCATCTTCACTGCTTTATTCATCTTCCTCTTCCTGCCTGAATGGAGTTTAA 3465 0.4309 MAAPSPSDGKSGNSVRGPSELDNATGEESQFSGFTPAMIFLLLTTLLCTPALSANHEASALFSWLHSSSSSPFPSFSNWNILDNTPCNWTSITCSPQGFVTEINIQSITLELPLLFNLSSFRFLQKLVISDANLTGTIPKEMGYCSELTLIDLSTNSLVGSIPASIGYLRNLESLILNSNQLTGKIPVELSSCIDLRNLLLFDNQLSGTLPTVLGKLSRLEVLRAGGNKDILGNIPAELGDCSNLTVLGLADTRISGSLPTSLGRLRKLQTLSIYTTMLSGEIPPDLGNCSELTDLFLYENSLSGSIPPELGNLQKLERLLLWQNSLVGSIPEEIGNCTSLKMIDFSFNSVSGTIPLSIGVLTELEEFMISNNNVSGSIPSNLSNCTSLMQLQVDTNQISGLIPPELGKLSNLNVLLAWENQLEGSIPSSLASCSNLQQIDLSHNALTGSIPTGLFQLQNLTKLLLISNDLSGTLPPEIGNCSSLIRLRLGNNRIVGGIPKTIGNLKSLNFLDLSGNRLSGQVPDEIGSCTELQMIDLSINTLEGPLPHTLASLSGLQVLDASSNQFSGRIPASIGRLLSLNKLILSRNLLSGPIPASLSLFSSLQLLDLSSNDLTGSIPVEVGRIQSLEIALNLSCNALTGPIPSQLSALTKLSVLDLSYNKLEGDLNPLGGLDNLVSLNISNNNFTGYLPDNKLFRQLSAKDIAGNEGLCSLGRDSCFLSNVGEAGATNGVGKSRKLKFAIGSLIVLTILMVVIGVIAMFRARRAMRGDDESELGDSWPWQFTPFQKLNFSVEQVLRCLVDANIIGKGCSGIVYRADMDNGEVIAVKKLWPVAMTPSNGCKDEKSGSVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRSTKLLMYDYMPNGSLGSLLHERTGNSLDWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLQFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVMLEVLTGKQPIDPTIPDGVHVADWVRQQRGGVDVLDPSLVSRPESDMEEMKQALGIALLCVNSSPDDRPTMKDVAALLKEIKHEREDYSKVDVILKGSPANADQANQHSSKVPASSSSASVMQKLYPKSNNTSFSASSLLYSSSSSCLNGV* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01539 1154 Gene3D Phosphorylase Kinase; domain 1 786 888 - -
Pte11g01539 1154 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 784 888 - -
Pte11g01539 1154 FunFam Predicted protein 212 307 - -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 548 630 IPR032675 -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 452 547 IPR032675 -
Pte11g01539 1154 SMART serkin_6 801 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01539 1154 MobiDBLite consensus disorder prediction 7 29 - -
Pte11g01539 1154 Pfam Leucine rich repeat N-terminal domain 54 95 IPR013210 -
Pte11g01539 1154 Gene3D Transferase(Phosphotransferase) domain 1 889 1101 - -
Pte11g01539 1154 PRINTS Leucine-rich repeat signature 651 664 - -
Pte11g01539 1154 PRINTS Leucine-rich repeat signature 605 618 - -
Pte11g01539 1154 ProSiteProfiles Protein kinase domain profile. 801 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01539 1154 MobiDBLite consensus disorder prediction 1102 1121 - -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 631 704 IPR032675 -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 56 170 IPR032675 -
Pte11g01539 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Pte11g01539 1154 Pfam Protein tyrosine and serine/threonine kinase 805 1079 IPR001245 GO:0004672|GO:0006468
Pte11g01539 1154 ProSiteProfiles Leucine-rich repeat profile. 653 675 IPR001611 GO:0005515
Pte11g01539 1154 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 54 211 - -
Pte11g01539 1154 MobiDBLite consensus disorder prediction 1 29 - -
Pte11g01539 1154 PANTHER RECEPTOR-LIKE PROTEIN 55 464 1085 - -
Pte11g01539 1154 MobiDBLite consensus disorder prediction 1103 1121 - -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 259 355 IPR032675 -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 171 258 IPR032675 -
Pte11g01539 1154 FunFam Predicted protein 308 405 - -
Pte11g01539 1154 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 889 1099 - -
Pte11g01539 1154 Gene3D Ribonuclease Inhibitor 356 451 IPR032675 -
Pte11g01539 1154 SUPERFAMILY L domain-like 64 423 - -
Pte11g01539 1154 SUPERFAMILY L domain-like 403 720 - -
Pte11g01539 1154 SUPERFAMILY Protein kinase-like (PK-like) 779 1081 IPR011009 -
Pte11g01539 1154 SMART LRR_typ_2 602 626 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 674 699 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 362 386 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 651 670 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 506 530 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 554 578 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 169 193 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 458 482 IPR003591 -
Pte11g01539 1154 SMART LRR_typ_2 314 338 IPR003591 -
Pte11g01539 1154 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Pte11g01539 1154 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 436 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01539 Pte-Chr11 33854225 33859286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01539 50 1100 Receptor kinase-like Gene Family AT5G56040 48.920 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte11g01539 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01539 - - pop:7460527 1663.28