Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01520 TCTACACCCTGACGAAAACATGGTTGTACCAAGGAACAATCTCTCATTGCTACTTGCAGTTTGCATCAACATAACAAGCCTCTTGCTGGCAGCCTCATCAAACACAAACAGAAATGTTCTGGATGTTGCGGGCACACTGAGGCAAGCCCATAAAATCATCAAGAAAGAAACAGAGAGGGAGACGAAGGAGACAAAAGAGAAGGAAACTATGACAGGATCATACTCACTGAGCATGCAACTGAACCCGAGGGAGACACTATGGAACGAAAACCACGGAAACTACAAAAGCCTAGTGGAGTCAAGACTAAGGAGGGAGTCAGAGAGAGTGAAGTCGCTGAACATGAAGGTGGAAGTGGCTGTGAAAAGGGTGAACAGATCGGAGATGTACCCGAGGGAAGAGGAGGTGAGAGAGGAAGAGATATCAGCGCCGGTGTCATCGGGGACAACCCAAGGAAGCGGAGAGTACTTCTCGCGAGTGTCAGTGGGCAGCCCACCGAAAGGGTTCTACATGGTCCTCGACACAGGCTCCGACGTCAACTGGCTGCAATGCAAACCATGCTCCGACTGTTACCAACAATCCGACCCCGTTTTCGACCCGACAGCATCCTCCTCCTACTACCCCTTAACCTGCGACGCCCAACAGTGCCAGGACCTCGAAATGTCCGCCTGCCGAAACGGGAGATGCCTCTACCAAGTCTCCTACGGTGACGGCTCCTTCACCGTTGGTGAATACGTCACCGAAACGCTCTCCTTCGCAACTGGCTCCGTTAACAAAGTCGCTATGGGCTGCGGTCACGATAATGAAGGCTTATTCGTTGGCGCTGCTGGCCTTCTTGGCCTTGGCGCCGGCACTTTGTCCTTCAACTCTCAAATCAAAGCCACTTCCTTTTCTTACTGTTTGGTCGATCGCGACTCCGGCAAATCCTCCACTCTCGAGTTCAACTCACCTCCACCCCCTGACTCCGTCGTTGCCCCATGCTCAAAAACCAAAAGGTTACCACTTTTTATTACGTCCAGCTCACCGGACGTCGGCGGTCAGATTGTCTCCCTCCCTCCTCAGACTTTCTCCCTTGACCAGTCCGGTTCTGGAGGCGTTATCGTTGACTCCGGCACCGCCATAACTCGCTTGCCTACTCAGGCTTATAACTCCGTCCGCGACGCCTTTAAGAGGATGACTCAGAACCTCCGTCCTGCTCAGGGGTTTGCGCTTTTCGACACCTGCTACGACTTGTCGTCTCTGCAGAGCGTGCGCGTTCCAACTCTCTCGTTTCATTTTAGTGGCGACAAGACCTGGGCGCTTCCGGCCAAGAATTATTTGATTCCGGTGGACGGTGCCGGAACTTATTGCTTCGCATTTGCTCCAACGACGTCGTCTCTGTCTATCATAGGGAACGTGCAGCAGCAGGGGACACGTGTCACTTTCGATCTAGCCAACTCTTTAGTGGGCTTCTCACCCAACAAGTGC 1465 0.5283 MVVPRNNLSLLLAVCINITSLLLAASSNTNRNVLDVAGTLRQAHKIIKKETERETKETKEKETMTGSYSLSMQLNPRETLWNENHGNYKSLVESRLRRESERVKSLNMKVEVAVKRVNRSEMYPREEEVREEEISAPVSSGTTQGSGEYFSRVSVGSPPKGFYMVLDTGSDVNWLQCKPCSDCYQQSDPVFDPTASSSYYPLTCDAQQCQDLEMSACRNGRCLYQVSYGDGSFTVGEYVTETLSFATGSVNKVAMGCGHDNEGLFVGAAGLLGLGAGTLSFNSQIKATSFSYCLVDRDSGKSSTLEFNSPPPPDSVVAPCSKTKRLPLFITSSSPDVGGQIVSLPPQTFSLDQSGSGGVIVDSGTAITRLPTQAYNSVRDAFKRMTQNLRPAQGFALFDTCYDLSSLQSVRVPTLSFHFSGDKTWALPAKNYLIPVDGAGTYCFAFAPTTSSLSIIGNVQQQGTRVTFDLANSLVGFSPNKC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01520 482 FunFam Aspartyl protease AED1 129 308 - -
Pste9g01520 482 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 359 370 IPR001969 GO:0004190|GO:0006508
Pste9g01520 482 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 164 175 IPR001969 GO:0004190|GO:0006508
Pste9g01520 482 PANTHER ASPARTYL PROTEASES 31 476 IPR001461 GO:0004190|GO:0006508
Pste9g01520 482 Gene3D Acid Proteases 321 482 IPR021109 -
Pste9g01520 482 Pfam Xylanase inhibitor N-terminal 149 307 IPR032861 -
Pste9g01520 482 Gene3D Acid Proteases 124 307 IPR021109 -
Pste9g01520 482 ProSiteProfiles Peptidase family A1 domain profile. 149 478 IPR033121 -
Pste9g01520 482 Pfam Xylanase inhibitor C-terminal 336 478 IPR032799 -
Pste9g01520 482 SUPERFAMILY Acid proteases 143 482 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01520 Pste-Chr9 15060385 15061854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01520 98 482 Miscellaneous Gene Families AT1G77480 24.703 1.05e-23 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01520 9 15060385 15061854 Pste9g01520 9 15060385 15061854 ECH