Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01352 AAAAAGTGGAAGAAGGAGGGAGTACTTGGGTTTTAGGAAGCAGCAGAGCAATAGCAGCGTAGAAATCACACATCGACGACTAACAAGAGACAGCCACGCCAAATGGGAAGGCAAGCCGTCACCAAATTGCTGTCCTCAATCGCCTCCCGCCGCCACGGCCTCCGCCAATTCTCGGCGGCGACGCCCGCCGTGTTCGTGGACAAGAGCACGCGCGTGATCTGCCAAGGCATCACCGGCAAGAACGGCACCTTCCACACCGAACAAGCTATCGAATACGGCACCAACATGGTTGGCGGTGTGACTCCTAAGAAGGGCGGAACCGAACACTTGGGCCTTCCCGTCTTCAACACCGTCGCTGAAGCCAAGGCTGAGACTAAGGCCAACGCCTCCGTCATCTACGTTCCTCCGCCGTTCGCCGCCGCCGCCATCATGGAGGCCATGGAGGCCGAGTTGGATCTCGTCGTCTGCATCACCGAGGGCATTCCCCAGCACGATATGGCGACCTTTTTCGTACAAAGTGTTCGCGTTAAGGCAGCACTTAATAGGCAGTCCAAGACTCGTTTGATAGGACCAAACTGCCCTGGTATTATCAAGCCTGGGGAATGTAAAATTGGAATTATGCCAGGATATATTCATAAGCCTGGTCGCATAGGAATTGTCTCTCGTTCTGGTACCTTGACTTATGAAGCCGTTTTCCAAACAACTGCTGTTGGCCTTGGACAATCCACTTGTGTGGGTATAGGAGGAGATCCCTTTAATGGAACAAACTTTGTAGACTGCCTTAAGAAGTTCTTAGAAGATCCTCAAACAGAAGGTATCATTCTTATAGGAGAGATAGGAGGAACTGCAGAAGAGGATGCTGCTGCACTAATTAAGGAAAGTGGAACTGAGAAGCCTATTGTTGCTTTTATTGCTGGTTTAACTGCTCCCCCTGGCCGTCGTATGGGCCATGCTGGAGCTATTGTGTCGGGTGGCAAGGGCACTGCACAAGACAAAATTAGAACCCTGAGGGAGGCTGGGGTCACAGTTGTGGAGTCCCCTGCCAAGATTGGAGCTGCCATGCTAGATGTTTTCAAGCAGAGGAGCTTGGTACAATAGTTTGGGTTAGTTAATTTATCAAATCATTTTGGTTCGATTATTTAAAACATGTTCAAAATTCCTTGATTCCCATGGTAAAAATGGGCTATTTTTCCTTTATTGTTTTTTAAAGTTACGAGAGGTGCATTAAAATAAAATACAAGATACTTTATATTTGCGGAAGTTTGAGACAGTCACAGTCCCTTTGTACTCCAGTTTTTGCGGCGTTGATTTGTGAACGTGTATACTTTGCTAATGAATTTCCAACAACTTCAAATTGTAGTTAACTCTAATAGATATTTTTCTTTGACCTCAA 1393 0.4738 MGRQAVTKLLSSIASRRHGLRQFSAATPAVFVDKSTRVICQGITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMATFFVQSVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLKKFLEDPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMLDVFKQRSLVQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01352 331 SMART CoA_binding_2 31 127 IPR003781 -
Pste9g01352 331 Gene3D - 156 329 IPR016102 -
Pste9g01352 331 FunFam Succinate--CoA ligase [ADP-forming] subunit alpha 27 155 - -
Pste9g01352 331 NCBIfam succinate--CoA ligase subunit alpha 31 323 IPR005810 GO:0003824
Pste9g01352 331 SUPERFAMILY Succinyl-CoA synthetase domains 158 326 IPR016102 -
Pste9g01352 331 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 272 285 IPR017440 -
Pste9g01352 331 Pfam CoA-ligase 186 307 IPR005811 GO:0003824
Pste9g01352 331 PANTHER SUCCINYL-COA LIGASE SUBUNIT ALPHA 21 329 - -
Pste9g01352 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 157 IPR036291 -
Pste9g01352 331 PIRSF SucCS_alpha 25 327 IPR005810 GO:0003824
Pste9g01352 331 FunFam Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial 156 329 - -
Pste9g01352 331 Pfam CoA binding domain 33 126 IPR003781 -
Pste9g01352 331 Hamap Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 28 324 IPR005810 GO:0003824
Pste9g01352 331 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 187 216 IPR033847 -
Pste9g01352 331 Gene3D - 29 155 - -
Pste9g01352 331 PRINTS Succinyl-CoA synthase signature 243 256 - -
Pste9g01352 331 PRINTS Succinyl-CoA synthase signature 109 126 - -
Pste9g01352 331 PRINTS Succinyl-CoA synthase signature 212 230 - -
Pste9g01352 331 PRINTS Succinyl-CoA synthase signature 276 293 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01352 117 326 Acyl Lipid Metabolism Gene Families AT3G06650 30.317 2.56e-21 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01352 9 12270336 12275373 Pste9g01352 9 12270336 12275373 ECH