Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01284 CAAACGTGTGTCATGTTCTTTGCGTTGGCAGTTTTCTTTCCTTCGCCGATAAACACTCCTTAGCTCTATCTTGTAGCTCAATCCTCTCCCCTCCAATCCAACTTCCAACTTCATTTTCTCTCTCTTACCTTACCCTTTTCTTCTCCCCGCATAAATTCACGCTCAACCACTTCCCAATCTGCGCATACAGATCCAAAGTTCTTCTCTTTTTCACCGTTCCACGCTAATTCCCCAACTGGGTCATCTAAATTCTCAACATTCTCTGCTATTTAACCAGACACTTATTCTGTGTTTTTTAATCCCAAACTTCTCAAATTTCATCCCTTTGGCTTTTCGGATCAAAATCTTCGACCCATGTCGCGAATCTTCGGTAGATGGAAGAAGGTGAAGGAAATGGCGTCACTTTCCGGCTTCCTGCCACGTGGGCACCATCGGACTGAGTTCAATTTTTGCCCAATTTCGACCCACCTGAACATGGTCGGCTGCCACCGGCGGCGGGAGGGTCCGGTGGGGGTTCAGGAGCGGTACAAGTGGGACCGTGGCGGTTCGGATGACAATCAGACCCGGAAGATCCGAGCTGAGGCTAATTGCCCACGTTGCACCAAAGACATGAACCTTGTTTTCTCCAATCGCCACTTTCCTACCCCACCAAGTGAACATAATTCTGAATTAGATGGTGGGGGAGATAGAGAAAAGGGTTACCAAGCGGTGAACCTTTGCCCAAGTTGTAAAACTGCTTATTATTTTCGCCCTTTTGACACTGCACCTTTGCAGGGTACCTTTGTGGAGATTGGTAGAGTCACTAGTACTAACAATAATGGTGTTAATAATGGAAGTGGTAAGGGACATTCTCCTAGGAGGATCGCCTATGGGAAGGGTGGTGGCAAAGAAGGTGGTAGTAGTACTAGTAGGACTAATCATGGGGGAGAGGAATTAGGGGGTAAGAGTAATAATAATGCAAGTAAATGGCTTGAAGTGTCATTGTGGGAGACTTTGATGTCCTACAATAGTGGTGGTGGTAGTGGCAGTAATGGGGAGCCACCCGAGTCGTGGCCCCCAGGTAGTGGCAATGGGAATGGTTTGGCTGTGCATACTCCACCAGGTCCACCTTTTGCACCAGGGATTAATGTTATCCGGGCTACGGGGCCACGGAGTGGTGGTTCAGGTGGTGGAGGTGGGGTTGATGGAGAGAAGACCACCTGGGGAGGGTCTAATCTGGGGAAGGATTTACCATCTCCGAAGGAGATATGTAAGGGTCTTGACAAGTTTGTTATTGGCCAAAAGAGAGCCAAGAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATATACCATGCCACTTTACAGAAAGGGTCAGCTGCAGATCCAGGAGCTTCAGAAGTTTTAGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCTACGGGGTCAGGGAAGACATTACTTGCTAAAACACTGGCTCGATTTGTGAATGTGCCATTTGCTGGTTATGTTGGAGAAGATGTGGAATCAATACTGTATAAACTACTTGCGGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGAATAATTTACATTGATGAAGTTGACAAAATAACTAAGAAGGCTGAGAGCTTAAACATCAGCCGGGATGTTTCTGGTGAAGGTGTTCAGCAGGCATTATTGAAAATGCTGGAAGGAACTATAGTAAATGTTCCTGAGAAAGGAGCTAGGAAGCATCCACGGGGGGATAACATTCAGATGGACACAAAAAATATTCTTTTTATTTGTGGTGGAGCATTTATTGATCTTGAAAAAACTATTTCAGAGAGACGACAAGATTCTTCTATCGGTTTTGGAGCACCAGTTCGTGCCAATATGAGAACTGGTAGAATAACAGATTCTGCATTAACATCATCTTTACTTGAGTCAGTGGAAAGTGCTGATCTTATTGCTTATGGCCTCATACCAGAGTTTATTGGAAGATTCCCTATCTTAGTCAGCTTGTCAGCTTTAACCGAAGACCAACTTATGATGGTCCTCACAGAACCAAAAAATGCTCTTGGTAAGCAGTACAAGAAGTTATTTAGCATGAATAGTGTTAAGTTACACTTTACTGAGAAAGCTCAAAGACTGATAGCAAAGAAAGCAATGGCTAAAAATACCGGTGCCAGAGGTTTAAGAGCCCTACTGGAAAGCATTTTAACTGAAGCCATGTTTGAGATTCCTGATATTAAAGCAGGAAGTGACCGAGTTGATGCAGTTGTCGTTGATGAAGAGTCAGTAGGATCAGTAACTGCCAATGGATGTGGAGGGAAAATTCTTCGTGGAGATGGAGCTTTGGAGCAGTACCTAGCTAAGATGAAGGATTCAGCGGTTAATGTTGATGTAGGCGAATCAGATTTACAAGAGAGGGATTTGGAGCTTACGTCAAGAGCCATGAGCTTGTGATATTATTACATTTACCATATTAGTGTATAATTTATCATTGTCATTGTCATTGTCATTTGTAAAAATCACATTCGAAAACTTGCTGTAATTATCCCTTGTATAACAGCATAGCTACTGGATAGGAAAGAAATAATAATAGAAGAAGAAAGAAAAGGTGTAGTGTAGCATTGCTAATTTACGCAGCACATTATACAAAATTTCAATTATTTTTTAGGAAGTCTCACTGAAGACATTTTTCTTTTGTACCGAGCAATTCCCTATTAAGGATTATTCATACTGTTGTCTCTCTTCCTTTAGATTAGATGGATTGGATAAATCCATTCCATGCCTCAATGTTCTTTTGAAACCAAAACAAACACTGG 2819 0.4282 MSRIFGRWKKVKEMASLSGFLPRGHHRTEFNFCPISTHLNMVGCHRRREGPVGVQERYKWDRGGSDDNQTRKIRAEANCPRCTKDMNLVFSNRHFPTPPSEHNSELDGGGDREKGYQAVNLCPSCKTAYYFRPFDTAPLQGTFVEIGRVTSTNNNGVNNGSGKGHSPRRIAYGKGGGKEGGSSTSRTNHGGEELGGKSNNNASKWLEVSLWETLMSYNSGGGSGSNGEPPESWPPGSGNGNGLAVHTPPGPPFAPGINVIRATGPRSGGSGGGGGVDGEKTTWGGSNLGKDLPSPKEICKGLDKFVIGQKRAKKVLSVAVYNHYKRIYHATLQKGSAADPGASEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGRITDSALTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEPKNALGKQYKKLFSMNSVKLHFTEKAQRLIAKKAMAKNTGARGLRALLESILTEAMFEIPDIKAGSDRVDAVVVDEESVGSVTANGCGGKILRGDGALEQYLAKMKDSAVNVDVGESDLQERDLELTSRAMSL 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01284 700 MobiDBLite consensus disorder prediction 219 290 - -
Pste9g01284 700 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 74 673 - -
Pste9g01284 700 MobiDBLite consensus disorder prediction 180 200 - -
Pste9g01284 700 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 286 554 - -
Pste9g01284 700 Pfam AAA domain (Cdc48 subfamily) 355 549 IPR003959 GO:0005524|GO:0016887
Pste9g01284 700 Gene3D - 286 554 IPR027417 -
Pste9g01284 700 SMART AAA_5 355 507 IPR003593 GO:0016887
Pste9g01284 700 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 555 657 - -
Pste9g01284 700 SMART ClpB_D2_small_2 556 646 IPR019489 -
Pste9g01284 700 CDD RecA-like_ClpX 293 553 - -
Pste9g01284 700 MobiDBLite consensus disorder prediction 92 112 - -
Pste9g01284 700 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 289 647 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Pste9g01284 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 642 IPR027417 -
Pste9g01284 700 Gene3D - 555 654 - -
Pste9g01284 700 MobiDBLite consensus disorder prediction 150 200 - -
Pste9g01284 700 Pfam C-terminal, D2-small domain, of ClpB protein 556 625 IPR019489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01284 Pste-Chr9 11348321 11355526 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01284 9 11348321 11355526 Pste9g01284 9 11348321 11355526 ECH