Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01267 GGGAAATGGGAAATGGGAAGGAGGACAGAATGGTAAAAAGACAAAGAGAAAGACGATGAAGATGCATGATATGGAGACAAAAGAGAGACAGAGAGTGGTTGGTTGAATTTGTTTCTGGTTGTGGTTGTTCTTGAGTTCCTCTTCTCCAGAGAAGCCTTAACGGGTCAATGACCCAGAGCCGAAAGGTGACGAAGCCCAAGGCCGAAGCCCAAAAGCTGTCGTTCTCGAGGAGCGGCATGAAAGTGATCGTCCCCCTTCAAGGAGTGGTGCAGGGCCGCGGAGGCCTTCTCCTCGGGACTCTTGTCCCATGCGCCCTCTTCTACTTCCTCCAACTCTACCTCAAACGACGCCGTTCCCTCCCTCCCCGAACCCACCCTCCCCGAACCTCTTCCCGCTCCAATCTCTCCTCACGCGCCTCCATTTCCCGCGTCCGCGTCTCCAAGCTCGCCTCTCAGATTTCCAAACCCGACGATTCCCTCTATTACTTGGGCCTCGACCGGGTTGCCCGAGATCCCTACCACGCTGTCCACAACCCTCTTGGCATTATTCAGTTGGGCTTGTCCGATAACAAGCTCTGCTTCGATTTGATTGAGGCATGGCTCGCCCGCAACTTCGACCTCACTGCTCTTGGTCTCGGTATCAATGGGATTTTGCCCTACCAGCCCTTTGATGGCTTCATCCATTTCAAATTGGCTTTGTCAGATTTTATGCATCAGGTGATGGGGGGATCAGTGAAATTTGACCCATCTAACATGGTACTAACAGCTGGAGCAACTCCTGCAATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCAGGCTTTGACAGAGATGTAAGATGGCGTCCAGGGGTAGACCTGATACCCGTTCACTGTCGTAGTACAGATAATTTCAATTTAAATATCACTGCTCTTGAACAAGCATTTAGTCAAGCGAGAAAACGGGGAGTCAAAGTTCGTGGAATTCTAATTTCCAACCCTTCAAATCCTGTGGGCAATATGATGACACAAGACATGCTTTACAGTCTTCTAGACTTTGCCGAAGAGAAAAACATTCATATCATTGCTGATGAAGTATTTGCAGGCTCCACATATGGAAGTGAGAAGTTTGTGAGCGTAGCTGAAATTCTTGATTCAGAGTATATAGACAAAAGTCGGGTCCATATAATATATGGCCTGTCGAAAGACCTCTCGCTTGCTGGCTTTAGAGTTGGGGTTATATGTTCCTTCAATGAGAGTGTTTTGGCCGCTGCCAAGAAGTTGAGCAGATTTGCCTCTATATCTGCTCCGACTCAGAGGTTAGTTACTTCAATGCTTTCGGATAAAAGATTTATTCGAGAGTATATAGAAACCAATCGGAAAAGAATACGACAAGTGCATGATGTATTTGTGGATTGTTTAAGTAAACTAGGAATAAAGTGTGCCAAAAGCAGTGCTGGTATGTACTGTTGGGCTGATATGAGTGGATTAATCCGACCTTATAGCGAGAAAGGAGAAATTGAGCTATGGGAGAAGTTTTTGAGTGTTGCCAAGATCAATATCACTCCTGGATCATCCTGCCATTGCATAGAACCAGGATGGTTTCGAATTTGTTTTACCACTATTACATTAGAGGAGATCCCTATGGTTATTGAGCGAATTAGGAAAGTTGTTGAAACTTGTAATTCTTCTAGCTGAAGTTCCATTATTTTTATTGACATTTATGGTTAATGCCTGATGTTGCAGTCAGAAATTGTTTTTCTAGAAATTTTGGAAAGAAATTTATACATCCC 1804 0.4512 MTQSRKVTKPKAEAQKLSFSRSGMKVIVPLQGVVQGRGGLLLGTLVPCALFYFLQLYLKRRRSLPPRTHPPRTSSRSNLSSRASISRVRVSKLASQISKPDDSLYYLGLDRVARDPYHAVHNPLGIIQLGLSDNKLCFDLIEAWLARNFDLTALGLGINGILPYQPFDGFIHFKLALSDFMHQVMGGSVKFDPSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCRSTDNFNLNITALEQAFSQARKRGVKVRGILISNPSNPVGNMMTQDMLYSLLDFAEEKNIHIIADEVFAGSTYGSEKFVSVAEILDSEYIDKSRVHIIYGLSKDLSLAGFRVGVICSFNESVLAAAKKLSRFASISAPTQRLVTSMLSDKRFIREYIETNRKRIRQVHDVFVDCLSKLGIKCAKSSAGMYCWADMSGLIRPYSEKGEIELWEKFLSVAKINITPGSSCHCIEPGWFRICFTTITLEEIPMVIERIRKVVETCNSSS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01267 513 CDD AAT_like 127 504 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 129 155 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 341 365 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 307 330 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 195 215 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 271 295 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 217 238 - -
Pste9g01267 513 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 373 396 - -
Pste9g01267 513 Pfam Aminotransferase class I and II 127 502 IPR004839 GO:0009058|GO:0030170
Pste9g01267 513 Gene3D - 149 396 IPR015421 GO:0003824
Pste9g01267 513 MobiDBLite consensus disorder prediction 68 83 - -
Pste9g01267 513 Gene3D Aspartate Aminotransferase, domain 1 115 501 IPR015422 GO:0003824
Pste9g01267 513 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 79 507 - -
Pste9g01267 513 MobiDBLite consensus disorder prediction 64 83 - -
Pste9g01267 513 SUPERFAMILY PLP-dependent transferases 101 507 IPR015424 -
Pste9g01267 513 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 347 360 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01267 Pste-Chr9 11080571 11084057 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01267 9 11080571 11084057 Pste9g01267 9 11080571 11084057 ECH