Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01240 CCAACCAATTTCTCTCCTTCTTCTCATCTACCTTCTCACTGCCTCTGTTTTTCTTTTTCTTTTTCTCTCTTCATAACACCACAACATAGTAAATCCAATGATCTCTCAAAAGACTGCAAGGAAGCAAGTTCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCAACAGTGGGAGGAGTGTCACTGGCAGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGAGCTCCTGCAAATGTGGCTGTTGGTATCTCAAGACTGGGGGGTTCATCCGCTTTTATTGGCAAGGTCGGGGCAGATGAATTCGGGTATATGTTGGCTGACATTTTAAAGCAGAACAATGTTGAGACATCCGGCATGCGGTTTGACTCTAATGCGAGAACTGCATTAGCTTTTGTTACACTTAGAGCAGATGGCGAGCGTGAATTCTTGTTTTTTCGCAATCCAAGTGCTGATATGCTCCTTCAAGAGTCAGAGCTGGATAAAAATCTCCTAAAGCAGGCTAGAATATTTCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAACTCTGGTTGCATTCTATCTTATGATCCAAATTTAAGACTGGCTCTATGGCCTTCTGCAGATGCTGCTCGAAAAGGTATAATGGATGTATGGGATGAAGCTGATGTCATAAAGATAAGTGAGGATGAGATTACTTTTTTGACTGGAGGTGACGATCCTTATGACGATAATGTTGTTTTGGATAAACTTTTTCATCCAAACCTCAAGCTTTTAATTGTTACTGAAGGGTCTCAGGGTTGCAGATATTACACCAAAGCATTTAAGGGCAGGGTTTCAGGTGTTAAAGTTAAACCTGTGGATACAACTGGCGCAGGTGATGCATTTGTTAGTGGGATTTTATACTGCGTAGCCTCTGACCAAACTATTTTTCAGGATGAGCAACGTCTTCGAAAGTCTTTATATTTTGCCAATGTATGTGGTGCCCTCACTGTAACTGAGAGAGGTGCAATTCCTGCTCTACCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCAGTAATATAATTGAATTGACAGTTGTTGTTTTTGTTATAGTTTGTTTGTTGTTAAGCTATAGCTTAGGTGATGCTAAGCTTGTTTTATCTTTTTAATTAAAATCTTTGGCTCTTTAGTTTTTTATATAAATTCAATTTACCGTGCGCTCTCAAGTTTTGGAAGGTGCAAGTTAACAGTTGAGCTCATGAATTAGCTCTAGGTCTAAGACTTGTAATAAAATCAAACGTATTTGGATATAATCAAGGCATGAAGAAATTGCTTACCGAAAAAAAAAAGGAATGAAGAAATTGTTAATGAACTGCTGGGCTTTGCATGATTTCTGAGCTGTACAATTATATCGTGAGATTAG 1441 0.3942 PTNFSPSSHLPSHCLCFSFSFSLFITPQHSKSNDLSKDCKEASSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLLKQARIFHYGSISLIDEPCKSAHLAAMRIAKNSGCILSYDPNLRLALWPSADAARKGIMDVWDEADVIKISEDEITFLTGGDDPYDDNVVLDKLFHPNLKLLIVTEGSQGCRYYTKAFKGRVSGVKVKPVDTTGAGDAFVSGILYCVASDQTIFQDEQRLRKSLYFANVCGALTVTERGAIPALPTKEAILQFLLEAAVI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01240 366 PRINTS Ribokinase signature 268 279 IPR002139 GO:0016301
Pste9g01240 366 PRINTS Ribokinase signature 71 90 IPR002139 GO:0016301
Pste9g01240 366 PRINTS Ribokinase signature 226 241 IPR002139 GO:0016301
Pste9g01240 366 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 76 100 IPR002173 GO:0016301
Pste9g01240 366 PANTHER HEXOKINASE FAMILY MEMBER 45 359 - -
Pste9g01240 366 Pfam pfkB family carbohydrate kinase 45 352 IPR011611 -
Pste9g01240 366 Gene3D - 42 365 IPR029056 -
Pste9g01240 366 SUPERFAMILY Ribokinase-like 46 360 IPR029056 -
Pste9g01240 366 CDD bac_FRK 45 347 - -
Pste9g01240 366 FunFam Probable fructokinase-2 43 364 - -
Pste9g01240 366 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 297 310 IPR002173 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01240 Pste-Chr9 10571899 10576337 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01240 9 10571899 10576337 Pste4g01760 4 13169934 13173104 ECH
Pste9g01240 9 10571899 10576337 Pste9g01240 9 10571899 10576337 ECH
Pste9g01240 9 10571899 10576337 Pste4g01760 4 13169934 13173104 PCT