Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01236 ACCAATTCATTATTGCATTTGCAAGATGGATGACATATTCCATTCAAATACACCCATTAAAAATTCCGCCAAAAGAGGAGGGTTAGTTGGGAACACACACACCCCTTCCCAAACCTAACTAACACACACTTAACACTTTCCATTCCAAACTACAAGTCCACAAACAAAAACTCACACACACAGTCCCTAAAAGAAAGAGAGGGAAAATTCTCCTCCATGGCTTCTTCACGCCCTGCCAATGTCGGAATCCTTGCCATGGACATCTACTTCCCTACCACCTGCGTCGCCCAGGAAGCTTTGGAGGCTCATGATGGGGTGAGCAGAGGGAAATACACTATTGGGCTTGGACAGGATTGCATGGCCTTCTGCACTGATGTTGAAGATGTTATCTCAATGAGCTTGACAGTAGTCACTTCACTTCTTGAAAAATATAATGTTGATCCAAAGCAAATTGGACGTTTGGAGGTTGGGAGTGAAACTGTCATTGACAAAAGCAAATCCATTAAGACTTTCTTGATGCAAATTTTTGAGGCAAGTGGTAATACTGACATTGAAGGTGTTGATTCAACAAATGCGTGCTATGGAGGAACAGCTGCCTTGTTTAATTGCGTGAATTGGGTGGAGAGTAGCTCATGGGATGGACGTTATGGACTTGTTGTATGTACAGACAGTGCGGTATATGCTGAAGGACCTGCTCGTCCCACTGGAGGAGCAGCTGCAATTGCCATGCTTGTAGGGCCAGATGCTCCTATTGCTTTTGAAAGCAAACTCAGAGGCAGCCACATGTCTCATGCATATGATTTTTACAAGCCAGATCTTGCTAGTGAATATCCAGTTGTTGATGGAAAACTCTCACAGACCTGTTATCTCATGGCACTTGATTCCTGTTATCGTCTCTTCTGTGAGAAATTTGAAAAATTGGAGGGGAGGCCTTTTTCAATGTCAGATTCTGATTATTTTGTGTTTCATTCTCCATATAACAAGGTAATTGTCATGCAGGAATTTTTTCTCCGTATTTGGAATGAAAACGAAAAGGCAGAGAAGTATGTCATAACGAGACCTACAATGACTCTACATAATTACTTTCTTGATGTATTGCAGCTTGTGCAGAAAAGTTTTGGCCGGCTATACTTCAATGACTTCTTGAGAAATCCCAGTTTTGTTGATGAAGTTGCAAGGGAAACCCTTGCACCGTATGCATCCTTATCTGGTGATGAGAGTTATCAAAGTCGTGATCTTGAAAAGGCAAACCAGCAAGCTGCAAAACATCTATATGATGCAAAGGTGCAGCCCAGCACCCTAATCCCAAAGCAAGTTGGTAACATGTACACTGCATCTCTTTATGCAGCATTTGCTTCGCTTCTTCACAATAAGAACGGTTCATTGGTGGGTAAACGGGTAGTTATGTTTTCATATGGAAGTGGTTTAACAGCTACAATGTTCTCCTTCCATTTTCAAGAAGGGCAGCATCCATTTAACTTGTCAAACATTGTAAAGGTGATGAATGTTTCAGACAAGTTGAAGCAGAGACTTGAGTTTCCTCCTGAAAAGTTTGCGGAAACATTGAAAATCATGGAGCACCGTTACGGGGGGAAGGACTTTGTGACAAGCAAGGATTGTAGCTACTTAGCTCCAAGGACCTTCTATCTCACCAATGTTGATTCCATGTACAGGAGATATTATGCCAAGAAGGACAAGGTGATCGGTTAGTTGATGATCACTGATATATTCAAATTTAGAATTAAAATGTATTTCGTTATGATTCACCTGTATTTCATCATCCCATAGGGTTATTTATGAAATTGTTTATAAGATGTTTCATTTTTTATGTAGTGATCAGGTTGGATCCAAAATAAGAATAAGTTATGTGCAAATTGTTAATTATTTTTAAATGCACCTAAAATGCAAATGTGTTAGAAGTATATGACTATTGCAAGAATGCAA 1944 0.4023 MASSRPANVGILAMDIYFPTTCVAQEALEAHDGVSRGKYTIGLGQDCMAFCTDVEDVISMSLTVVTSLLEKYNVDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEASGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESKLRGSHMSHAYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRLFCEKFEKLEGRPFSMSDSDYFVFHSPYNKVIVMQEFFLRIWNENEKAEKYVITRPTMTLHNYFLDVLQLVQKSFGRLYFNDFLRNPSFVDEVARETLAPYASLSGDESYQSRDLEKANQQAAKHLYDAKVQPSTLIPKQVGNMYTASLYAAFASLLHNKNGSLVGKRVVMFSYGSGLTATMFSFHFQEGQHPFNLSNIVKVMNVSDKLKQRLEFPPEKFAETLKIMEHRYGGKDFVTSKDCSYLAPRTFYLTNVDSMYRRYYAKKDKVIG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01236 497 SUPERFAMILY Thiolase-like 179 490 IPR016039 GO:0016746
Pste9g01236 497 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 109 124 IPR000590 GO:0004421|GO:0008299
Pste9g01236 497 NCBIfam hydroxymethylglutaryl-CoA synthase 6 259 IPR010122 GO:0004421|GO:0008299
Pste9g01236 497 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 179 258 IPR013746 GO:0004421|GO:0006084|GO:0010142
Pste9g01236 497 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 293 492 IPR013746 GO:0004421|GO:0006084|GO:0010142
Pste9g01236 497 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 5 178 IPR013528 -
Pste9g01236 497 SUPERFAMILY Thiolase-like 8 176 IPR016039 GO:0016746
Pste9g01236 497 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 256 - -
Pste9g01236 497 CDD init_cond_enzymes 8 411 - -
Pste9g01236 497 Gene3D - 2 292 IPR016039 GO:0016746
Pste9g01236 497 Gene3D - 293 494 IPR016039 GO:0016746
Pste9g01236 497 FunFam - 56 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01236 Pste-Chr9 10509392 10514836 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01236 9 10509392 10514836 Pste9g01236 9 10509392 10514836 ECH