Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01216 CACTAAACCAACACACACAACCACCCCTTTTCACCACACTCTCTAATCTCTTCAATTCAACCAACTCAACACATATCATTCTTTTGTGTCCTCAATTATGGGGGCTGGTGTTTCCACAACTGCAGCAGAAAATGATGATGGGGGCACCTTTTCTTTGCCTTCAGAAACTTGTCTTGATGATATTCCTGAGAATTGCATCTCTTCATTGATGATGAGTTTTGATCCACAAGAGATTTGCACATTGGCCAGAGTCAACAAGGCTTTTCACAGAGCTTCCTCAGCTGACTTTGTATGGGAATCAAAATTGCCCCCAAACTATAAATTCCTTGTCAACAAAGTACTTGGTCAACAAAATCTTGGTTCCATCACCAAGAAAGAGATCTATGCCAAACTGTGTCAACCCAATTTCTTTGATGGTGGTACCAAAGAAGTTTGGCTGCACAGATGCAGTGGACAAGTTTGTCTGTTCATGTCATCAAAATCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATTATATTCCAACTGAGGAATCCAGGTTCAAGAGTGTAGCATATCTTCAACAAATGTGGTGGGTTGAAGTGATAGGAGAGCTAGAGTTTGAGTTTCCAAAGGGAAACTACAGCATATTTTTCAGGCTTCAATTGGGAAAGCCTTCCAAGAGATTGGGCCGGCGCGTGTGCAACCTTAATCAAGTCCATGGTTGGGAAATCAAGCCCGTTAGATTTCAACTATCAACATTGGACGGTCAACGTTCTCTCTCACAGTCCTATTTGCGTGGGCCTGGAGAGTGGGCCCACTACCATGTTGGAGACTTTGTAATCGAGAAACCCAATGGGCCAACAAACATCAAGTTTTCTTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGTCTTTGTATAGATGGGGTAGTGATTTGTCCAACGGAGTTTTCTGAAAGATTGAAACAAATTTAGCAAAGTATACTTTAAACAATCAATCACTTCTGTGAAAGCAAAATTAGGTGTAGGTCTTCTTCTCTCTTGTTTACTTCTTATGTTTTTTACTATTTTAGATTTTTTAGGTTACTGTTTCTTTTAGGAAGAATTACTTGAGGGCACTCTATTTTTGTCACAAAGGAGTGGTGAGCTTTAGAAAAAGAAAAAAGTGTAAAAGAATAATAGATTTTGAGACAGCATTTGTGTTACTTAAAGTCTTTGAACCATGGTTCTTGTACTGCCCTATTGGGTGCCCTTAGTTTTGTGTAATTGTGAGGGTTCCTTTTTGCTGACTTGCTTGTAAAGAAATTGAAATATGTGAAATAGTGTTCACGGTTGC 1328 0.3953 MGAGVSTTAAENDDGGTFSLPSETCLDDIPENCISSLMMSFDPQEICTLARVNKAFHRASSADFVWESKLPPNYKFLVNKVLGQQNLGSITKKEIYAKLCQPNFFDGGTKEVWLHRCSGQVCLFMSSKSFKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSIFFRLQLGKPSKRLGRRVCNLNQVHGWEIKPVRFQLSTLDGQRSLSQSYLRGPGEWAHYHVGDFVIEKPNGPTNIKFSLAQIDCTHTKGGLCIDGVVICPTEFSERLKQI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01216 289 PANTHER F-BOX PROTEIN PP2-A15 20 286 - -
Pste9g01216 289 Pfam Phloem protein 2 121 279 IPR025886 -
Pste9g01216 289 SUPERFAMILY F-box domain 19 98 IPR036047 GO:0005515
Pste9g01216 289 CDD F-box_AtSKIP3-like 26 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01216 Pste-Chr9 10110595 10113862 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01216 9 10110595 10113862 Pste4g01854 4 13750753 13755208 ECH
Pste9g01216 9 10110595 10113862 Pste9g01216 9 10110595 10113862 ECH
Pste9g01216 9 10110595 10113862 Pste4g01854 4 13750753 13755208 PCT