LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste9g01195	ATGGAGAACATGGTTAGGCCCCACGGTGGAAGGTACTTAGCTAGTGGGCACTGGCTACTGGGTAGTGTCACTCACACCAAAGAGAACAACCACAAACAAACTCTTTGTCTTAGGCACTCTTTTTTATTCTCCGGTCAACGGTCAGTCGCCGGAGGAATGGAGGATCACAACTCCGATGACTGGCTTCCACCAGGTTGGACGGTGGAAGTGAGGGTGAGGAAAAATGGAAAGAGAGACAAGTATTACTTTCACCCCTCAAATGAACTAAAATTCAATTCCAAGGTGGAGGTATTTCGCTATCTTGACAATGCTCAGAACAAAGTCAGCATCCAGAAAATCTCTCCTAATGTTATAGTTGAGAAAGCTATTGCAGAAGGGTTACCACCAGGATGGGTGAAAAAGACCAGAATCGCAACAAAAGGAGACACAGTTAGAAGAGATACGTTCTACATTGACCCTGTAAATGGTTATGCATTCTGCTCAATAAAAGATGTTGATTGCTATCTTAAATCTGGAGAGATAGGAAGGAGTGAATCTGAATCAGAATACAAAGATGGCAGTGATATGGAGCTAAAAGCTGACAAATCTGCTGTATGGCCAGCTAGTGTAACCATGAAACCAACATTATCAACTAGCATGGGTCAAAGATCAGATTTGGACATGATATCTAATGACCAACAAATTTCAAAATCTGCAAGTTCTGGAGAATATTCCAATCAGTGTGTGGTGGGTGCTGAATTGACCAGTTCAGTTGTATCAGGGGCTAGAAGTTCAGATCATACACAAGGGAAGGTTCGTGTAGCCCAAGAAAAGCAACTTCAAGAAAATTCAGGGACAGAACATGGAACTGAAAAAGCTCAGGGCCAAGATCGCCAGTTCAAAAACAAGCACAAGAAAGAGATCAATTTGCCTCGCCGGGCTTCAAAACGTCTTGCTGGAATTAAGGTTGATCCTGTTCCGGAACTTAAAACAAGAAATAATAGAGGTCGTTGTGTTGTAGTTAAACAATCAGGTGAGGAAGAAACCATCACAAATGTGGATAAATCTCCCAACAGCATGCCTGATGGTCTATCAAAACAGTTTAATGCGACTGGGGGTGGGTCAGAAATTAAGTACAAATCTGAAAAGAATATTGAGAAGACTCTAAAAGTGCAAAGAAGTGACAAGCATAAAGAATGCTTCTCTTTTTTGCCTCTGGAGAACAATGATACTGTGGAAGAGTGTGGAAATGGAGATAAAGTTGATGCAAAGTTAGATTACACCCTTGACTTTCCCCTCAGAGAACTACTAACAGACCCGTGTATTGCATTTGCAATTCAAACTCTCACTGGAGTAACCTTTGAAGCCTCCAAAGCCTCACAAACTTCTTCTGAGTTACAAAACAACCAGCATTCCAAATCTTCTTCAGCCACCGCCTTTGGTGGTGAAGGGCATGGCAAGAAAAGCAATGATGGCTTAGGTGACAATGTGTTCTCATCTCTAGAGAACCCTTCTATTCCACAAGAACAAGCTGGTGATACCAAATCTGATTTAAAAGCCAAGAATGAGAATGCAGGACCATCATCTGAAAAGACAGTTGACATGTCATGGATGGATCCATGCATTGAATTTGCTATAAAAACTCTCACTGGCACTATAGACTCTGATCAAAATCCCAAGAATTGCCTTCAACAGCAACTCAATAACCAACATAGTGAGATGGCATTGTCAAGTGTCAGTGTAGATAACATATACCAGACTGATTACTATTGCAACCAACAGTTTGGCACGCAGAAAACAGTGTTTAAAAAGTCTTTTGTGAATCCTTCACTGCAGCAAACCAGAAATATTGGGATTGGAAATTTGGCTGGAGCCAGACTCTCTCACGGCGGTGAAGATACTAGAAAGAATGTTTGTTAG	1899	0.416	MENMVRPHGGRYLASGHWLLGSVTHTKENNHKQTLCLRHSFLFSGQRSVAGGMEDHNSDDWLPPGWTVEVRVRKNGKRDKYYFHPSNELKFNSKVEVFRYLDNAQNKVSIQKISPNVIVEKAIAEGLPPGWVKKTRIATKGDTVRRDTFYIDPVNGYAFCSIKDVDCYLKSGEIGRSESESEYKDGSDMELKADKSAVWPASVTMKPTLSTSMGQRSDLDMISNDQQISKSASSGEYSNQCVVGAELTSSVVSGARSSDHTQGKVRVAQEKQLQENSGTEHGTEKAQGQDRQFKNKHKKEINLPRRASKRLAGIKVDPVPELKTRNNRGRCVVVKQSGEEETITNVDKSPNSMPDGLSKQFNATGGGSEIKYKSEKNIEKTLKVQRSDKHKECFSFLPLENNDTVEECGNGDKVDAKLDYTLDFPLRELLTDPCIAFAIQTLTGVTFEASKASQTSSELQNNQHSKSSSATAFGGEGHGKKSNDGLGDNVFSSLENPSIPQEQAGDTKSDLKAKNENAGPSSEKTVDMSWMDPCIEFAIKTLTGTIDSDQNPKNCLQQQLNNQHSEMALSSVSVDNIYQTDYYCNQQFGTQKTVFKKSFVNPSLQQTRNIGIGNLAGARLSHGGEDTRKNVC	632

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste9g01195	632	MobiDBLite	consensus disorder prediction	486	505	-	-
	Pste9g01195	632	SUPERFAMILY	DNA-binding domain	125	174	IPR016177	GO:0003677
	Pste9g01195	632	PANTHER	OS04G0193200 PROTEIN	45	592	IPR038945	-
	Pste9g01195	632	Gene3D	-	52	115	-	-
	Pste9g01195	632	Gene3D	-	116	200	-	-
	Pste9g01195	632	MobiDBLite	consensus disorder prediction	253	296	-	-
	Pste9g01195	632	Pfam	Methyl-CpG binding domain	58	109	IPR001739	GO:0003677
	Pste9g01195	632	Pfam	Methyl-CpG binding domain	127	173	IPR001739	GO:0003677
	Pste9g01195	632	ProSiteProfiles	Methyl-CpG-binding domain (MBD) profile.	52	122	IPR001739	GO:0003677
	Pste9g01195	632	MobiDBLite	consensus disorder prediction	455	526	-	-
	Pste9g01195	632	MobiDBLite	consensus disorder prediction	455	472	-	-
	Pste9g01195	632	MobiDBLite	consensus disorder prediction	253	283	-	-
	Pste9g01195	632	SUPERFAMILY	DNA-binding domain	50	106	IPR016177	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste9g01195	Pste-Chr9	9716077	9721827	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste9g01195	9	9716077	9721827	Pste9g01195	9	9716077	9721827	ECH